miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TGGAGAAGCAGGGCACGTGCA

selected species: Glycine max

60 records found

Showing records 1 - 50

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#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACCATATTCATGATTGGTGGTTAGGTCCTGTTGGAGAAGCAGGGCACGTGCAACTCAGTTCTAGTTCTAGCTCTATTATAGCTGCTCTAGTTTATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTTTGTTTGGA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164k
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

CAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTACCTCATGAACACACGGCGTGTGAGCTCGGAGATCAATCACATTCTTTTCTGCTTCATTTGACCAACCCAGAGAGATCCTATGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACAACAGCACCTTATATTACATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

TCTATTCTCATCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACTTCCCTCTCACTCAGAGACTCTATGCTTGTTCAAGCTGATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATGTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

AATGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGCTCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTAT
---------------------TGGAGAAGCAGGGCACGTGCA 	1503
---------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

AGCTTGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATAGAAAATCACTTGTTTTTTTCTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTATCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGTAGCACCTTAAATAGCATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

CCAATTTGGTTCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACATTCCTGATGCTTGCTCCAGCTTATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATTTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

TCTACTTACTACTGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGATCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTGTTTTTCTCCTA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with: MNEST040438 MNEST048547
Overlaps with miRBase pre-miRNAs: gma-MIR164a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTATATTTTTTATTGGTGGTTAACTCCTGTTGGAGAAGCAGGGCACGTGCAACTCACTTCTAGTTAATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTCCACTTTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTGGGTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTAGGCTCTCTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCC
---------------------TGGAGAAGCAGGGCACGTGCA 	1503
---------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ATTTTTCTTCACTGGGTGAGAAGCTACTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTCGGCTCTCTTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCCATTCCCTCTC
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

ATAACTCCTCCAACCCACTTAGCATGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATCTTGTTTTTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTACCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGCAGCACCTTAAATATAAAAATGCTGAAAATGGGTTTTGATT
---------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
---------------------------------------------------TGGAGAAGCAGGGCACGTGC 	10

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Glycine max	GSM543396	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCTCTTCCCCATC	up	5	0

Secondary structure

AGAGTCAGAAAAGTATCACTATATCAAGTGACATGATCATCAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTAACTCATGAACACTACACGGGGCGTGAACTCGGAGAATCATATTCTCTTCTGCTTCATTTCACCAACAAGAGAGATCCTATTAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGACAACAGCACCTTATATATATTGCATTTGGAAATGTTGAAGGATGAGGTTTGCTTGGCTTCTGCT
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1503
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGC 	10

Overlaps with miRBase pre-miRNAs: gma-MIR164i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACCATATTCATGATTGGTGGTTAGGTCCTGTTGGAGAAGCAGGGCACGTGCAACTCAGTTCTAGTTCTAGCTCTATTATAGCTGCTCTAGTTTATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTTTGTTTGGA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164k
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

CAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTACCTCATGAACACACGGCGTGTGAGCTCGGAGATCAATCACATTCTTTTCTGCTTCATTTGACCAACCCAGAGAGATCCTATGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACAACAGCACCTTATATTACATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

TCTATTCTCATCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACTTCCCTCTCACTCAGAGACTCTATGCTTGTTCAAGCTGATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATGTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

AATGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGCTCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTAT
---------------------TGGAGAAGCAGGGCACGTGCA 	1342
----------------------GGAGAAGCAGGGCACGTGCA 	1
----------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

AGCTTGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATAGAAAATCACTTGTTTTTTTCTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTATCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGTAGCACCTTAAATAGCATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

CCAATTTGGTTCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACATTCCTGATGCTTGCTCCAGCTTATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATTTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

TCTACTTACTACTGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGATCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTGTTTTTCTCCTA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with: MNEST040438 MNEST048547
Overlaps with miRBase pre-miRNAs: gma-MIR164a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTATATTTTTTATTGGTGGTTAACTCCTGTTGGAGAAGCAGGGCACGTGCAACTCACTTCTAGTTAATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTCCACTTTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTGGGTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTAGGCTCTCTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCC
---------------------TGGAGAAGCAGGGCACGTGCA 	1342
----------------------GGAGAAGCAGGGCACGTGCA 	1
----------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ATTTTTCTTCACTGGGTGAGAAGCTACTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTCGGCTCTCTTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCCATTCCCTCTC
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
--------------------------------GGAGAAGCAGGGCACGTGCA 	1
--------------------------------GGAGAAGCAGGGCACGTGCA 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

ATAACTCCTCCAACCCACTTAGCATGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATCTTGTTTTTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTACCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGCAGCACCTTAAATATAAAAATGCTGAAAATGGGTTTTGATT
---------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
----------------------------------------------------GGAGAAGCAGGGCACGTGCA 	1
----------------------------------------------------GGAGAAGCAGGGCACGTGCA 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Glycine max	GSM852280	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCTCTTCCCCATC	up	5	0

Secondary structure

AGAGTCAGAAAAGTATCACTATATCAAGTGACATGATCATCAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTAACTCATGAACACTACACGGGGCGTGAACTCGGAGAATCATATTCTCTTCTGCTTCATTTCACCAACAAGAGAGATCCTATTAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGACAACAGCACCTTATATATATTGCATTTGGAAATGTTGAAGGATGAGGTTTGCTTGGCTTCTGCT
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1342
------------------------------------------------------------------------GGAGAAGCAGGGCACGTGCA 	1
------------------------------------------------------------------------GGAGAAGCAGGGCACGTGCA 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGCCCCTCTTCCCCATC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGCCCCTCTTCCCCAT 	1

Overlaps with miRBase pre-miRNAs: gma-MIR164i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACCATATTCATGATTGGTGGTTAGGTCCTGTTGGAGAAGCAGGGCACGTGCAACTCAGTTCTAGTTCTAGCTCTATTATAGCTGCTCTAGTTTATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTTTGTTTGGA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164k
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
26	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

CAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTACCTCATGAACACACGGCGTGTGAGCTCGGAGATCAATCACATTCTTTTCTGCTTCATTTGACCAACCCAGAGAGATCCTATGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACAACAGCACCTTATATTACATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
27	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

TCTATTCTCATCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACTTCCCTCTCACTCAGAGACTCTATGCTTGTTCAAGCTGATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATGTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
28	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

AATGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGCTCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTAT
---------------------TGGAGAAGCAGGGCACGTGCA 	4632
---------------------TGGAGAAGCAGGGCACGTGC 	10
---------------------TGGAGAAGCAGGGCACGTG 	7
----------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
29	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

AGCTTGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATAGAAAATCACTTGTTTTTTTCTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTATCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGTAGCACCTTAAATAGCATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
30	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

CCAATTTGGTTCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACATTCCTGATGCTTGCTCCAGCTTATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATTTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
31	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

TCTACTTACTACTGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGATCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTGTTTTTCTCCTA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with: MNEST040438 MNEST048547
Overlaps with miRBase pre-miRNAs: gma-MIR164a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
32	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTATATTTTTTATTGGTGGTTAACTCCTGTTGGAGAAGCAGGGCACGTGCAACTCACTTCTAGTTAATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTCCACTTTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
33	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTGGGTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTAGGCTCTCTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCC
---------------------TGGAGAAGCAGGGCACGTGCA 	4632
---------------------TGGAGAAGCAGGGCACGTGC 	10
---------------------TGGAGAAGCAGGGCACGTG 	7
----------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
34	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ATTTTTCTTCACTGGGTGAGAAGCTACTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTCGGCTCTCTTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCCATTCCCTCTC
-------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-------------------------------TGGAGAAGCAGGGCACGTGC 	10
-------------------------------TGGAGAAGCAGGGCACGTG 	7
--------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
35	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

ATAACTCCTCCAACCCACTTAGCATGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATCTTGTTTTTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTACCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGCAGCACCTTAAATATAAAAATGCTGAAAATGGGTTTTGATT
---------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
---------------------------------------------------TGGAGAAGCAGGGCACGTGC 	10
---------------------------------------------------TGGAGAAGCAGGGCACGTG 	7
----------------------------------------------------GGAGAAGCAGGGCACGTGCA 	69

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
36	Glycine max	GSM543394	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCTCTTCCCCATC	up	5	0

Secondary structure

AGAGTCAGAAAAGTATCACTATATCAAGTGACATGATCATCAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTAACTCATGAACACTACACGGGGCGTGAACTCGGAGAATCATATTCTCTTCTGCTTCATTTCACCAACAAGAGAGATCCTATTAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGACAACAGCACCTTATATATATTGCATTTGGAAATGTTGAAGGATGAGGTTTGCTTGGCTTCTGCT
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	4632
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGC 	10
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTG 	7
------------------------------------------------------------------------GGAGAAGCAGGGCACGTGCA 	69

Overlaps with miRBase pre-miRNAs: gma-MIR164i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
37	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACCATATTCATGATTGGTGGTTAGGTCCTGTTGGAGAAGCAGGGCACGTGCAACTCAGTTCTAGTTCTAGCTCTATTATAGCTGCTCTAGTTTATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTTTGTTTGGA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164k
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
38	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

CAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTACCTCATGAACACACGGCGTGTGAGCTCGGAGATCAATCACATTCTTTTCTGCTTCATTTGACCAACCCAGAGAGATCCTATGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACAACAGCACCTTATATTACATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
39	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

AATGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGCTCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTAT
---------------------TGGAGAAGCAGGGCACGTGCA 	1302
----------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
40	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

TCTATTCTCATCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACTTCCCTCTCACTCAGAGACTCTATGCTTGTTCAAGCTGATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATGTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
41	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

AGCTTGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATAGAAAATCACTTGTTTTTTTCTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTATCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGTAGCACCTTAAATAGCATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
42	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCTCCTTTTCCAGC	up	1	0

Secondary structure

CCAATTTGGTTCATTGGTGGCTAGGTCTTGCTGGAGAAGCAGGGCACGTGCAACATTCCTGATGCTTGCTCCAGCTTATTTTGCACGTGCTCTCCTTTTCCAGCTTGATTTTCCTACCATTTTATTTCTTCT
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
43	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

TCTACTTACTACTGGTTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAAGTCTCTTGGATCTCAAATGCCACTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGGTTTCTCCCCTTGTTTTTCTCCTA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with: MNEST040438 MNEST048547
Overlaps with miRBase pre-miRNAs: gma-MIR164a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
44	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTATATTTTTTATTGGTGGTTAACTCCTGTTGGAGAAGCAGGGCACGTGCAACTCACTTCTAGTTAATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTCCACTTTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
45	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACTGGGTGAGAAGCTCCTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTAGGCTCTCTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCC
---------------------TGGAGAAGCAGGGCACGTGCA 	1302
----------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
46	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ATTTTTCTTCACTGGGTGAGAAGCTACTTGTTGGAGAAGCAGGGCACGTGCAACTCTCTCGGCTCTCTTTAAGCGCCATTGAACCCTTTGCACGTGCTCCCCTTCTCCAACACGGCTTCCTCACCCTCCATTCCCTCTC
-------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
--------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
47	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

ATAACTCCTCCAACCCACTTAGCATGTGGCAAAGGTGCATGCTGAGCAAGATGGAGAAGCAGGGCACGTGCAATTCTAACTCATGAAACCATAGAATCATCTTGTTTTTTCTTCTTTTCACTCTAACCAAATAGATTCCTCTACCTGCAGTGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACGGCAGCACCTTAAATATAAAAATGCTGAAAATGGGTTTTGATT
---------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
----------------------------------------------------GGAGAAGCAGGGCACGTGCA 	18

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
48	Glycine max	GSM543393	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCTCTTCCCCATC	up	5	0

Secondary structure

AGAGTCAGAAAAGTATCACTATATCAAGTGACATGATCATCAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTAACTCATGAACACTACACGGGGCGTGAACTCGGAGAATCATATTCTCTTCTGCTTCATTTCACCAACAAGAGAGATCCTATTAGTTAGTTCTTCATGTGCCCCTCTTCCCCATCATGACAACAGCACCTTATATATATTGCATTTGGAAATGTTGAAGGATGAGGTTTGCTTGGCTTCTGCT
-----------------------------------------------------------------------TGGAGAAGCAGGGCACGTGCA 	1302
------------------------------------------------------------------------GGAGAAGCAGGGCACGTGCA 	18

Overlaps with miRBase pre-miRNAs: gma-MIR164i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
49	Glycine max	GSM543395	TGGAGAAGCAGGGCACGTGCA	CACGTGCTCCCCTTCTCCAAC	up	2	0

Secondary structure

ACCATATTCATGATTGGTGGTTAGGTCCTGTTGGAGAAGCAGGGCACGTGCAACTCAGTTCTAGTTCTAGCTCTATTATAGCTGCTCTAGTTTATCTGATTTTGCACGTGCTCCCCTTCTCCAACACGATTTTCCTACCTCATTTTGTTTGGA
-------------------------------TGGAGAAGCAGGGCACGTGCA 	483

Overlaps with miRBase pre-miRNAs: gma-MIR164k
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
50	Glycine max	GSM543395	TGGAGAAGCAGGGCACGTGCA	CATGTGCCCCCCTTCCCCATC	up	5	0

Secondary structure

CAGAATTGAATTAGGTGCATGTTGTGCAAGATGGAGAAGCAGGGCACGTGCAATACTACCTCATGAACACACGGCGTGTGAGCTCGGAGATCAATCACATTCTTTTCTGCTTCATTTGACCAACCCAGAGAGATCCTATGAGTTAGTCCTTCATGTGCCCCCCTTCCCCATCATGACAACAGCACCTTATATTACATTTG
-------------------------------TGGAGAAGCAGGGCACGTGCA 	483

Overlaps with miRBase pre-miRNAs: gma-MIR164h
HuntMi prediction: true miRNA