miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGCAAGATGTCGGAATAGCTG

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM322543-14323 TGGCAAGATGTCGGAATAGCTG GCTATGCCTCATCTAGTCAAT up 3 1


Secondary structure

GTGTACCGAAAGTTCGCTCCACGTTAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAGCACAGCGGATCGAACATTTTATCGTCCGAAAAAATGTGATTATTTTTGAAAAGCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTGGAGGATAAAAA
-----------------------------------------TGGCAAGATGTCGGAATAGCT 	16
-----------------------------------------TGGCAAGATGTCGGAATAG 	1
-----------------------------------------TGGCAAGATGTCGGAATAGCTGA 	16
-----------------------------------------TGGCAAGATGTCGGAATAGCTG 	32
-------------------------------------------------------------------------------------------------------------------------GGCTATGCCTCATCTAGTCAAT 	18

Overlaps with: MNEST036369 MNEST036370
Overlaps with miRBase pre-miRNAs: dme-mir-31b
HuntMi prediction: true miRNA