miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: TGGCACAATCTGCGTACGTAGA

selected species: Caenorhabditis elegans



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Caenorhabditis elegans GSM297751-9445 TGGCACAATCTGCGTACGTAGA TATGTACAAATGTTGCGCTGCC up 5 0


Secondary structure

ATGATTCCCAACTTTTTCTTTATTCGTATTCTCAGTTTTTCGACGTCCACGTGGCACAATCTGCGTACGTAGAAAGATCAAAAAGTCACTTCTATGTACAAATGTTGCGCTGCCTGGCACAGTGAATGAATTTATGGGTTAAAAAAAAAAGACGGCAGACGG
---------------------------------------------------TGGCACAATCTGCGTACGTAGA 	56

Overlaps with: MNEST038387
Overlaps with miRBase pre-miRNAs: cel-mir-784
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Caenorhabditis elegans GSM297752-9446 TGGCACAATCTGCGTACGTAGA TATGTACAAATGTTGCGCTGCC up 5 0


Secondary structure

ATGATTCCCAACTTTTTCTTTATTCGTATTCTCAGTTTTTCGACGTCCACGTGGCACAATCTGCGTACGTAGAAAGATCAAAAAGTCACTTCTATGTACAAATGTTGCGCTGCCTGGCACAGTGAATGAATTTATGGGTTAAAAAAAAAAGACGGCAGACGG
---------------------------------------------------TGGCACAATCTGCGTACGTAGA 	40

Overlaps with: MNEST038387
Overlaps with miRBase pre-miRNAs: cel-mir-784
HuntMi prediction: true miRNA