miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGCACAGGGTCCAGCTGTCGG

selected species: Sus scrofa



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Sus scrofa GSM636844 TGGCACAGGGTCCAGCTGTCGG GATGATGGTCCCTGTGTTTGG up 3 1


Secondary structure

GGCTGTCCCCATGGCACAGGGTCCAGCTGTCGGCTGTAATACCCGATGGGTCGATGATGGTCCCTGTGTTTGGGGCGAGCA
-----------TGGCACAGGGTCCAGCTGTCGGC 	1
-----------TGGCACAGGGTCCAGCTGTCGG 	5
-----------TGGCACAGGGTCCAGCTGTCG 	2
--------------------------------------------------TCGATGATGGTCCCTGTGTT 	1
--------------------------------------------------TCGATGATGGTCCCTGTGTTT 	4
---------------------------------------------------CGATGATGGTCCCTGTGTTT 	2
---------------------------------------------------CGATGATGGTCCCTGTGTTTG 	2
---------------------------------------------------CGATGATGGTCCCTGTGTT 	1
----------------------------------------------------GATGATGGTCCCTGTGTTTG 	1


HuntMi prediction: true miRNA