miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGCAGTGTCTTAGCTGGTTGT

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM531978 TGGCAGTGTCTTAGCTGGTTGT AATCAGCAAGTATACTGCCCTA up 1 2


Secondary structure

GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTCTTAGCTGGTTGTTGTGAGCAATAGTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGTG
---------------------TGGCAGTGTCTTAGCTGGTTGT 	84
---------------------TGGCAGTGTCTTAGCTGGTTG 	26
---------------------TGGCAGTGTCTTAGCTGGTT 	30
---------------------TGGCAGTGTCTTAGCTGGT 	14
---------------------TGGCAGTGTCTTAGCTGGTTGTTGT 	6
---------------------TGGCAGTGTCTTAGCTGGTTGTT 	4
----------------------GGCAGTGTCTTAGCTGGTTGT 	8
----------------------GGCAGTGTCTTAGCTGGTT 	5
---------------------------------------------------------------CAATCAGCAAGTATACTGCCCTA 	1
----------------------------------------------------------------AATCAGCAAGTATACTGCCCTA 	6
----------------------------------------------------------------AATCAGCAAGTATACTGCCCT 	4

Overlaps with: MNEST008066
Overlaps with miRBase pre-miRNAs: ggo-mir-34a ptr-mir-34a ppy-mir-34a hsa-mir-34a ppa-mir-34a
HuntMi prediction: true miRNA