miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TGGCTCAGTTCAGCAGGAACAG

selected species: Danio rerio

20 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Danio rerio	GSM540644	TGGCTCAGTTCAGCAGGAACAG	GTGCCTTCTGAGCTGATATCAGT	down	4	1

Secondary structure

ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGC
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	1
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	2
------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	14
------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	4

Overlaps with: MNEST034228
Overlaps with miRBase pre-miRNAs: dre-mir-24-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Danio rerio	GSM540644	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTAAACTGGTATCAGT	down	3	1

Secondary structure

CGACTGAGGGCTGTTCCCACTTGTGCCTGCTAAACTGGTATCAGTATGTTGATTTAGTGCTGGCTCAGTTCAGCAGGAACAGGTGTGAAGTCCTCTACTCT
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	1
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	2
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	14
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
------------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	4

Overlaps with: MNEST034231
Overlaps with miRBase pre-miRNAs: dre-mir-24-4
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Danio rerio	GSM540644	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTGTGCTGATAATCAGT	down	3	2

Secondary structure

GGCTGGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGGACGGCTGTGACTGGCTCAGTTCAGCAGGAACAGGGGCCTGGT
------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	1
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	2
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	14
-------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
-------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	4

Overlaps with: MNEST034229
Overlaps with miRBase pre-miRNAs: dre-mir-24-2 dre-mir-24-5
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Danio rerio	GSM540644	TGGCTCAGTTCAGCAGGAACAG	GTGCCTACTGAGCTGATTACAGT	down	5	1

Secondary structure

GAGATAGATGGAGCTGGCCTCCCGTGCCTACTGAGCTGATTACAGTACTGTGCAAACACTGGCTCAGTTCAGCAGGAACAGGAGTCTGGTCCACAAACTCC
----TAGATGGAGCTGGCCTCCC 	1
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	1
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	2
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	14
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	4

Overlaps with: MNEST034230
Overlaps with miRBase pre-miRNAs: dre-mir-24-3
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Danio rerio	GSM540645	TGGCTCAGTTCAGCAGGAACAG	GTGCCTTCTGAGCTGATATCAGT	down	4	1

Secondary structure

ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGC
------------GTGCCTTCTGAGCTGATATCAGT 	1
-------------TGCCTTCTGAGCTGATATCAGT 	2
-------------TGCCTTCTGAGCTGATATCAG 	1
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	4
-----------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	6
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	56
------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	1563
------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	132
------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	178
------------------------------------------------TGGCTCAGTTCAGCAGGAA 	2
-------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	3
-------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	4

Overlaps with: MNEST034228
Overlaps with miRBase pre-miRNAs: dre-mir-24-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Danio rerio	GSM540645	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTAAACTGGTATCAGT	down	3	1

Secondary structure

CGACTGAGGGCTGTTCCCACTTGTGCCTGCTAAACTGGTATCAGTATGTTGATTTAGTGCTGGCTCAGTTCAGCAGGAACAGGTGTGAAGTCCTCTACTCT
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	4
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	6
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGT 	8
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	56
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	1563
------------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	132
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	178
------------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	2
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	3
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	4

Overlaps with: MNEST034231
Overlaps with miRBase pre-miRNAs: dre-mir-24-4
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Danio rerio	GSM540645	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTGTGCTGATAATCAGT	down	3	2

Secondary structure

GGCTGGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGGACGGCTGTGACTGGCTCAGTTCAGCAGGAACAGGGGCCTGGT
-------------TGCCTGCTGTGCTGATAATCAGT 	1
-------------TGCCTGCTGTGCTGATAATCAG 	1
------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	4
------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	6
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	56
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	1563
-------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	132
-------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	178
-------------------------------------------------TGGCTCAGTTCAGCAGGAA 	2
--------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	3
--------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	4

Overlaps with: MNEST034229
Overlaps with miRBase pre-miRNAs: dre-mir-24-2 dre-mir-24-5
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Danio rerio	GSM540645	TGGCTCAGTTCAGCAGGAACAG	GTGCCTACTGAGCTGATTACAGT	down	5	1

Secondary structure

GAGATAGATGGAGCTGGCCTCCCGTGCCTACTGAGCTGATTACAGTACTGTGCAAACACTGGCTCAGTTCAGCAGGAACAGGAGTCTGGTCCACAAACTCC
----------------------CGTGCCTACTGAGCTGATTACAG 	3
-----------------------GTGCCTACTGAGCTGATTACAG 	1
------------------------TGCCTACTGAGCTGATTACAGT 	9
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	4
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	6
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	56
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	1563
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	132
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	178
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	2
------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	3
------------------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	4

Overlaps with: MNEST034230
Overlaps with miRBase pre-miRNAs: dre-mir-24-3
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Danio rerio	GSM540642	TGGCTCAGTTCAGCAGGAACAG	GTGCCTTCTGAGCTGATATCAGT	down	4	1

Secondary structure

ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGC
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	2
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	1
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	4
------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	80
------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	2
------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1

Overlaps with: MNEST034228
Overlaps with miRBase pre-miRNAs: dre-mir-24-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Danio rerio	GSM540642	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTAAACTGGTATCAGT	down	3	1

Secondary structure

CGACTGAGGGCTGTTCCCACTTGTGCCTGCTAAACTGGTATCAGTATGTTGATTTAGTGCTGGCTCAGTTCAGCAGGAACAGGTGTGAAGTCCTCTACTCT
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	2
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	1
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGT 	5
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	4
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	80
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
------------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	2
------------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGGT 	1

Overlaps with: MNEST034231
Overlaps with miRBase pre-miRNAs: dre-mir-24-4
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Danio rerio	GSM540642	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTGTGCTGATAATCAGT	down	3	2

Secondary structure

GGCTGGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGGACGGCTGTGACTGGCTCAGTTCAGCAGGAACAGGGGCCTGGT
------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	2
------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	1
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	4
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	80
-------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
-------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	2
-------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1

Overlaps with: MNEST034229
Overlaps with miRBase pre-miRNAs: dre-mir-24-2 dre-mir-24-5
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Danio rerio	GSM540642	TGGCTCAGTTCAGCAGGAACAG	GTGCCTACTGAGCTGATTACAGT	down	5	1

Secondary structure

GAGATAGATGGAGCTGGCCTCCCGTGCCTACTGAGCTGATTACAGTACTGTGCAAACACTGGCTCAGTTCAGCAGGAACAGGAGTCTGGTCCACAAACTCC
---ATAGATGGAGCTGGCCTCCC 	1
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	2
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	1
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	4
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	80
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	2
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	2
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1

Overlaps with: MNEST034230
Overlaps with miRBase pre-miRNAs: dre-mir-24-3
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Danio rerio	GSM540643	TGGCTCAGTTCAGCAGGAACAG	GTGCCTTCTGAGCTGATATCAGT	down	4	1

Secondary structure

ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGC
-------------TGCCTTCTGAGCTGATATCAGT 	1
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	10
------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	421
------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	3
------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	17

Overlaps with: MNEST034228
Overlaps with miRBase pre-miRNAs: dre-mir-24-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Danio rerio	GSM540643	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTAAACTGGTATCAGT	down	3	1

Secondary structure

CGACTGAGGGCTGTTCCCACTTGTGCCTGCTAAACTGGTATCAGTATGTTGATTTAGTGCTGGCTCAGTTCAGCAGGAACAGGTGTGAAGTCCTCTACTCT
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGT 	7
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	10
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	421
------------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	3
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	17
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGGT 	1

Overlaps with: MNEST034231
Overlaps with miRBase pre-miRNAs: dre-mir-24-4
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Danio rerio	GSM540643	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTGTGCTGATAATCAGT	down	3	2

Secondary structure

GGCTGGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGGACGGCTGTGACTGGCTCAGTTCAGCAGGAACAGGGGCCTGGT
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	10
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	421
-------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	3
-------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	17

Overlaps with: MNEST034229
Overlaps with miRBase pre-miRNAs: dre-mir-24-2 dre-mir-24-5
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Danio rerio	GSM540643	TGGCTCAGTTCAGCAGGAACAG	GTGCCTACTGAGCTGATTACAGT	down	5	1

Secondary structure

GAGATAGATGGAGCTGGCCTCCCGTGCCTACTGAGCTGATTACAGTACTGTGCAAACACTGGCTCAGTTCAGCAGGAACAGGAGTCTGGTCCACAAACTCC
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	10
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	421
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	3
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	17

Overlaps with: MNEST034230
Overlaps with miRBase pre-miRNAs: dre-mir-24-3
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Danio rerio	GSM540646	TGGCTCAGTTCAGCAGGAACAG	GTGCCTTCTGAGCTGATATCAGT	down	4	1

Secondary structure

ACCTGAGCTCCGGTGCCTTCTGAGCTGATATCAGTTGTAGTAAATCACTGGCTCAGTTCAGCAGGAACAGGAGTGTGGC
------------GTGCCTTCTGAGCTGATATCAGT 	2
-------------TGCCTTCTGAGCTGATATCAGTT 	1
-------------TGCCTTCTGAGCTGATATCAGT 	5
----------------------------------------------ACTGGCTCAGTTCAGCAGGAAC 	1
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	6
-----------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	15
-----------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	38
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGA 	7
------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	7666
------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	316
------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	659
------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	186
------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1
-------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	15
-------------------------------------------------GGCTCAGTTCAGCAGGAACAGGA 	1
-------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	6

Overlaps with: MNEST034228
Overlaps with miRBase pre-miRNAs: dre-mir-24-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Danio rerio	GSM540646	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTAAACTGGTATCAGT	down	3	1

Secondary structure

CGACTGAGGGCTGTTCCCACTTGTGCCTGCTAAACTGGTATCAGTATGTTGATTTAGTGCTGGCTCAGTTCAGCAGGAACAGGTGTGAAGTCCTCTACTCT
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	6
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	15
-----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	38
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGT 	47
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	7666
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	316
------------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	659
------------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	186
------------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	15
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGGT 	4
-------------------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	6

Overlaps with: MNEST034231
Overlaps with miRBase pre-miRNAs: dre-mir-24-4
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Danio rerio	GSM540646	TGGCTCAGTTCAGCAGGAACAG	GTGCCTGCTGTGCTGATAATCAGT	down	3	2

Secondary structure

GGCTGGTCTCCTGTGCCTGCTGTGCTGATAATCAGTGGACGGCTGTGACTGGCTCAGTTCAGCAGGAACAGGGGCCTGGT
------------GTGCCTGCTGTGCTGATAATCA 	1
------------GTGCCTGCTGTGCTGATAATC 	1
------------GTGCCTGCTGTGCTGATAATCAG 	2
------------GTGCCTGCTGTGCTGATAATCAGT 	2
-------------TGCCTGCTGTGCTGATAATCAGT 	4
-------------TGCCTGCTGTGCTGATAATCAG 	1
-----------------------------------------------ACTGGCTCAGTTCAGCAGGAAC 	1
------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	6
------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	15
------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	38
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	7666
-------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	316
-------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	659
-------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	186
-------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1
--------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	15
--------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	6

Overlaps with: MNEST034229
Overlaps with miRBase pre-miRNAs: dre-mir-24-2 dre-mir-24-5
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Danio rerio	GSM540646	TGGCTCAGTTCAGCAGGAACAG	GTGCCTACTGAGCTGATTACAGT	down	5	1

Secondary structure

GAGATAGATGGAGCTGGCCTCCCGTGCCTACTGAGCTGATTACAGTACTGTGCAAACACTGGCTCAGTTCAGCAGGAACAGGAGTCTGGTCCACAAACTCC
----------------------CGTGCCTACTGAGCTGATTACAGT 	4
----------------------CGTGCCTACTGAGCTGATTACAG 	7
----------------------CGTGCCTACTGAGCTGATTACA 	4
-----------------------GTGCCTACTGAGCTGATTACA 	1
-----------------------GTGCCTACTGAGCTGATTAC 	1
-----------------------GTGCCTACTGAGCTGATTACAGT 	19
------------------------TGCCTACTGAGCTGATTACAGT 	80
------------------------TGCCTACTGAGCTGATTACAGTA 	1
------------------------TGCCTACTGAGCTGATTACAG 	1
------------------------TGCCTACTGAGCTGATTACA 	2
---------------------------------------------------------ACTGGCTCAGTTCAGCAGGAAC 	1
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACA 	6
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAAC 	15
----------------------------------------------------------CTGGCTCAGTTCAGCAGGAACAG 	38
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGGA 	7
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAG 	7666
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACAGG 	316
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAACA 	659
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAAC 	186
-----------------------------------------------------------TGGCTCAGTTCAGCAGGAA 	1
------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGG 	15
------------------------------------------------------------GGCTCAGTTCAGCAGGAACAGGA 	1
------------------------------------------------------------GGCTCAGTTCAGCAGGAACAG 	6

Overlaps with: MNEST034230
Overlaps with miRBase pre-miRNAs: dre-mir-24-3
HuntMi prediction: true miRNA