miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGGGATTTGGAGAAGTGGTGA

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM531982 TGGGGATTTGGAGAAGTGGTGA ATCTTTTTTCTCCACTGCCCAGCT down 6 2


Secondary structure

TTGCTCAGATGTCATCTTTTTTCTCCACTGCCCAGCTGTCTTGCTAAACAGTGTCTGGGGATTTGGAGAAGTGGTGAGCGCAGGTCT
-------------------------------------------------------TGGGGATTTGGAGAAGTGGTGA 	7
-------------------------------------------------------TGGGGATTTGGAGAAGTGGTG 	3
--------------------------------------------------------GGGGATTTGGAGAAGTGGTGA 	2


HuntMi prediction: not a miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM531978 TGGGGATTTGGAGAAGTGGTGA ATCTTTTTTCTCCACTGCCCAGCT down 6 2


Secondary structure

TTGCTCAGATGTCATCTTTTTTCTCCACTGCCCAGCTGTCTTGCTAAACAGTGTCTGGGGATTTGGAGAAGTGGTGAGCGCAGGTCT
-------------------------------------------------------TGGGGATTTGGAGAAGTGGTGA 	54
-------------------------------------------------------TGGGGATTTGGAGAAGTGGTG 	17
-------------------------------------------------------TGGGGATTTGGAGAAGTGGT 	4
-------------------------------------------------------TGGGGATTTGGAGAAGTGG 	1


HuntMi prediction: not a miRNA