miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGGTGGCAAACAAAGACGAC

selected species: Arabidopsis thaliana



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM415785 TGGGTGGCAAACAAAGACGAC CGTCTCGGTTCGCGATCCACA down 4 0


Secondary structure

AGCAAGGGACTGTCGTCTCGGTTCGCGATCCACAAGTAATCTTTTGTGGAGATTATGAAAACAATCATCACGAGAGGCTACGTGTGGGTGGCAAACAAAGACGACAATCCCTATT
------------TCGTCTCGGTTCGCGATCCAC 	4
---------------TCTCGGTTCGCGATCCACAAG 	1
---------------------TTCGCGATCCACAAGTAATCT 	2
----------------------------------------------------------------------------------TGTGGGTGGCAAACAAAGACG 	2
------------------------------------------------------------------------------------TGGGTGGCAAACAAAGACGAC 	36
-------------------------------------------------------------------------------------GGGTGGCAAACAAAGACGAC 	1

Overlaps with: MNEST040176 MNEST040177
Overlaps with miRBase pre-miRNAs: ath-MIR851
HuntMi prediction: true miRNA