miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGTAACTCCACCACCGTTGGC

selected species: Bombyx mori



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Bombyx mori GSM449725_whole_body_clean TGGTAACTCCACCACCGTTGGC CAACGGGGTAAGAGTTCCCTTT up 3 2


Secondary structure

GTATCTGGGCCTGGTAACTCCACCACCGTTGGCGTTATCAATCCGCCAACGGGGTAAGAGTTCCCTTTCCTAGACG
-----------TGGTAACTCCACCACCGTTGGC 	6

Overlaps with: MNEST035629
Overlaps with miRBase pre-miRNAs: bmo-mir-2765
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Bombyx mori GSM449726_Anterior_silkgland_clean TGGTAACTCCACCACCGTTGGC CAACGGGGTAAGAGTTCCCTTT up 3 2


Secondary structure

GTATCTGGGCCTGGTAACTCCACCACCGTTGGCGTTATCAATCCGCCAACGGGGTAAGAGTTCCCTTTCCTAGACG
-----------TGGTAACTCCACCACCGTTGGC 	40
-----------TGGTAACTCCACCACCGTTGG 	8

Overlaps with: MNEST035629
Overlaps with miRBase pre-miRNAs: bmo-mir-2765
HuntMi prediction: true miRNA