miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGGTGTGAGGTTGGGCCAGGA

selected species: Mus musculus



3 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM539855 TGGTGTGAGGTTGGGCCAGGA CGAGGCTCCCCACCACACCCTG up 4 3


Secondary structure

CAATACTCACAGTCTCCCAGCTGGTGTGAGGTTGGGCCAGGATGAAACCCAAGGCTCTCCGAGGCTCCCCACCACACCCTGCTGCTGAAGACTGCCTAG
---------------------TGGTGTGAGGTTGGGCCAGGAT 	4
---------------------TGGTGTGAGGTTGGGCCAGGA 	11
---------------------TGGTGTGAGGTTGGGCCAGG 	1
---------------------TGGTGTGAGGTTGGGCCAGGATGAA 	1


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Mus musculus GSM539869 TGGTGTGAGGTTGGGCCAGGA CGAGGCTCCCCACCACACCCTG up 4 3


Secondary structure

CAATACTCACAGTCTCCCAGCTGGTGTGAGGTTGGGCCAGGATGAAACCCAAGGCTCTCCGAGGCTCCCCACCACACCCTGCTGCTGAAGACTGCCTAG
---------------------TGGTGTGAGGTTGGGCCAGGATGA 	1
---------------------TGGTGTGAGGTTGGGCCAGGAT 	10
---------------------TGGTGTGAGGTTGGGCCAGGA 	18
---------------------TGGTGTGAGGTTGGGCCAGG 	1
---------------------TGGTGTGAGGTTGGGCCAG 	3


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Mus musculus GSM539867 TGGTGTGAGGTTGGGCCAGGA CGAGGCTCCCCACCACACCCTG up 4 3


Secondary structure

CAATACTCACAGTCTCCCAGCTGGTGTGAGGTTGGGCCAGGATGAAACCCAAGGCTCTCCGAGGCTCCCCACCACACCCTGCTGCTGAAGACTGCCTAG
---------------------TGGTGTGAGGTTGGGCCAGGAT 	1
---------------------TGGTGTGAGGTTGGGCCAGGA 	17
---------------------TGGTGTGAGGTTGGGCCAGG 	1
---------------------TGGTGTGAGGTTGGGCCAG 	1


HuntMi prediction: true miRNA