miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGTAAACATCCTACACTCAGCT

selected species: Gallus gallus



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Gallus gallus GSM388803 TGTAAACATCCTACACTCAGCT CTGGGGGGTGGATGTTTACTTC up 2 2


Secondary structure

GTTAAGCTAACTTTTAGTTCCTGTAAACATCCTACACTCAGCTATAACAAGTGGTAGGGCTGGGGGGTGGATGTTTACTTCAACTGACTTGGAAAGGCA
---------------------TGTAAACATCCTACACTCAGCT 	62

Overlaps with: MNEST025917
Overlaps with miRBase pre-miRNAs: gga-mir-30b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Gallus gallus GSM523740_broiler_clean_reads_field_16-30 TGTAAACATCCTACACTCAGCT CTGGGGGGTGGATGTTTACTTC up 2 2


Secondary structure

GTTAAGCTAACTTTTAGTTCCTGTAAACATCCTACACTCAGCTATAACAAGTGGTAGGGCTGGGGGGTGGATGTTTACTTCAACTGACTTGGAAAGGCA
---------------------TGTAAACATCCTACACTCAGCT 	31
-----------------------------------------------------------CTGGGGGGTGGATGTTTACTTC 	3

Overlaps with: MNEST025917
Overlaps with miRBase pre-miRNAs: gga-mir-30b
HuntMi prediction: true miRNA