miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGTGAACTGGTCATGCTCTTAA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TGTGAACTGGTCATGCTCTTAA GAGAGCATGACCAGTGTGCCATATA down 1 3


Secondary structure

CCTGTACACATTGAGAGCATGACCAGTGTGCCATATAAAACCTTTTTCTCATGTGAACTGGTCATGCTCTTAATGTGCGATA
-----------TGAGAGCATGACCAGTGTGCCATA 	2
---------------------------------------------------TGTGAACTGGTCATGCTCTTAA 	28
---------------------------------------------------TGTGAACTGGTCATGCTCTTA 	3
---------------------------------------------------TGTGAACTGGTCATGCTCTTAAT 	1
----------------------------------------------------GTGAACTGGTCATGCTCTTAAT 	6
-----------------------------------------------------TGAACTGGTCATGCTCTTAAT 	1
-----------------------------------------------------TGAACTGGTCATGCTCTTAA 	1

Overlaps with: MNEST035152
Overlaps with miRBase pre-miRNAs: api-mir-3048
HuntMi prediction: true miRNA