miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGTGGGTTGACAGTGCTGAGGT

selected species: Gallus gallus



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Gallus gallus GSM523741_layer_clean_reads_field_16-30 TGTGGGTTGACAGTGCTGAGGT CCCGAGCTCTGCTGCCCCACATC up 5 1


Secondary structure

TTGGAAATGGGACTGGGGGGGTGTGGGTTGACAGTGCTGAGGTCTCCCCAAGCCCCCGAGCTCTGCTGCCCCACATCTCCCCCCCCCCACAGGCG
---------------------TGTGGGTTGACAGTGCTGAGGT 	5


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Gallus gallus GSM523740_broiler_clean_reads_field_16-30 TGTGGGTTGACAGTGCTGAGGT CCCGAGCTCTGCTGCCCCACATC up 5 1


Secondary structure

TTGGAAATGGGACTGGGGGGGTGTGGGTTGACAGTGCTGAGGTCTCCCCAAGCCCCCGAGCTCTGCTGCCCCACATCTCCCCCCCCCCACAGGCG
---------------------TGTGGGTTGACAGTGCTGAGGT 	5


HuntMi prediction: true miRNA