miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTAAAGCTTTGATGACGGGATA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TTAAAGCTTTGATGACGGGATA TCTTGTTCATCAAAGTTTTAGGT down 1 1


Secondary structure

TACATTATTTTTTTTATTACTGACGTACGTTTTCTTGTTCATCAAAGTTTTAGGTCGTACACGTCTATAGGAACACTTAAAGCTTTGATGACGGGATAGTGTGCGCCGGGGATGTCGTCGAGTGGTG
----------------------------------------------------------------------------TTAAAGCTTTGATGACGGGATA 	1093
----------------------------------------------------------------------------TTAAAGCTTTGATGACGGGAT 	191
----------------------------------------------------------------------------TTAAAGCTTTGATGACGGGA 	9
-----------------------------------------------------------------------------TAAAGCTTTGATGACGGGATA 	12

Overlaps with: MNEST035141
Overlaps with miRBase pre-miRNAs: api-mir-3041
HuntMi prediction: true miRNA