miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTACAAAACATTCAGAATTTTG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TTACAAAACATTCAGAATTTTG AAATTCTGAATGTTATTGTAGACA down 1 2


Secondary structure

ACACCAATCTCTGAATAAATGGAAATTCTGAATGTTATTGTAGACATTCTATGATTTTAAATGTTACAAAACATTCAGAATTTTGTTTTATAGAGGTATCACAC
----------------------AAATTCTGAATGTTATTGTAGACA 	205
----------------------AAATTCTGAATGTTATTGTAGAC 	16
----------------------AAATTCTGAATGTTATTGTAGA 	11
----------------------AAATTCTGAATGTTATTGTAG 	4
----------------------AAATTCTGAATGTTATTGTA 	1
---------------------------------------------------------------TTACAAAACATTCAGAATTTTGT 	57
---------------------------------------------------------------TTACAAAACATTCAGAATTTTG 	1416
---------------------------------------------------------------TTACAAAACATTCAGAATTTTGTT 	4
---------------------------------------------------------------TTACAAAACATTCAGAATTTT 	18
---------------------------------------------------------------TTACAAAACATTCAGAATTT 	11
---------------------------------------------------------------TTACAAAACATTCAGAATT 	11
----------------------------------------------------------------TACAAAACATTCAGAATTTTG 	1
------------------------------------------------------------------CAAAACATTCAGAATTTTGT 	1

Overlaps with: MNEST035137
Overlaps with miRBase pre-miRNAs: api-mir-3037
HuntMi prediction: true miRNA