miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTAGATTCACGCACAAACTCG

selected species: Arabidopsis thaliana



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Arabidopsis thaliana GSM415786-5994 TTAGATTCACGCACAAACTCG TGTTTTGTGCTTGAATCTAATT down 3 1


Secondary structure

TCATTAGAAGAGTCGTATTACATGTTTTGTGCTTGAATCTAATTCAACAGGCTTTATGTAAGAGATTCTTTAACAATTCCTATAATCTTTGTTGTTGGATTAGATTCACGCACAAACTCGTAATCTGTCTTTTCGATTT
---TTAGAAGAGTCGTATTACA 	1
----------------------TGTTTTGTGCTTGAATCTAATTCA 	1
----------------------TGTTTTGTGCTTGAATCTAATTC 	1
----------------------TGTTTTGTGCTTGAATCTAATT 	3
----------------------TGTTTTGTGCTTGAATCTAA 	2
------------------------TTTTGTGCTTGAATCTAATTCA 	1
---------------------------------------------------------------------------------------------------TTAGATTCACGCACAAACTCGT 	55
---------------------------------------------------------------------------------------------------TTAGATTCACGCACAAACTCG 	274
---------------------------------------------------------------------------------------------------TTAGATTCACGCACAAACTC 	25
---------------------------------------------------------------------------------------------------TTAGATTCACGCACAAACT 	13
----------------------------------------------------------------------------------------------------TAGATTCACGCACAAACTCG 	3


HuntMi prediction: true miRNA