miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTCAATATACCGGATGGTCTGG

selected species: Caenorhabditis elegans



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Caenorhabditis elegans GSM427346-5695 TTCAATATACCGGATGGTCTGG AGACTATCTAGGAAATATTGAACT down 1 2


Secondary structure

CTTTATTTCACCAGACTATCTAGGAAATATTGAACTAATACAAATTTTAGTTCAATATACCGGATGGTCTGGTGAAAGCAA
------------AGACTATCTAGGAAATATTGAACTAA 	1
------------AGACTATCTAGGAAATATTGAACT 	1
------------AGACTATCTAGGAAATATTG 	1
--------------------------------------------------TTCAATATACCGGATGGTCTGG 	6
--------------------------------------------------TTCAATATACCGGATGGTCTG 	1

Overlaps with: MNEST038460
Overlaps with miRBase pre-miRNAs: cel-mir-4813
HuntMi prediction: true miRNA