miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTGACAGAAGATAGAGAGCAC

selected species: Glycine max



35 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

ACTAGTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAAAAAGCAGCTAGGGAACTCATGAATTGTGCATCTCACTCCTTTGTGCTCTCTATACTTCTGTCATCACCCTTCAGCCTCCCTGTC
-------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13
------------------------ACAGAAGATAGAGAGCACAG 	128



Overlaps with miRBase pre-miRNAs: gma-MIR156i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTAAGCTTCTGTCATCC up 2 1


Secondary structure

AGGCATTAGTTGGTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCACATATACATGGAACAGGAATTTAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAAGCTTCTGTCATCCACCTCCACTACCCTCCTT
-------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13
------------------------ACAGAAGATAGAGAGCACAG 	128



Overlaps with miRBase pre-miRNAs: gma-MIR156l
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTAGGCTTCTGTCATCC up 2 1


Secondary structure

AAGAAGGAATATTGGGGAGAAGAGGAAGGGAGGATCTAGTTGATAGGGTTGTTGACAGAAGATAGAGAGCACAGATAGTGATATGCATAAAAATATGGAACGGGAAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAGGCTTCTGTCATCCACACCTTCACTGCCCCTCCATTTCTCACAACTCAATCTTCCATTACTC
-------------------------------------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------------------------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------------------------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------------------------------------TTGACAGAAGATAGAGAGCA 	147
---------------------------------------------------TTGACAGAAGATAGAGAGC 	25
----------------------------------------------------TGACAGAAGATAGAGAGCACA 	271
----------------------------------------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------------------------------------GACAGAAGATAGAGAGCAC 	13
------------------------------------------------------ACAGAAGATAGAGAGCACAG 	128



Overlaps with miRBase pre-miRNAs: gma-MIR156m
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

GCTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCTTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTCT
-------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13
------------------------ACAGAAGATAGAGAGCACAG 	128


Overlaps with: MNEST003451
Overlaps with miRBase pre-miRNAs: gma-MIR156d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAACA up 0 0


Secondary structure

AGCTAGTTGGTGAGAAGTACATTGACAGAAGATAGAGAGCACAAAACTGCTCACACACAAAAGCTTTTTTGGGTATGATCACCTGTGCTCTCTATCTTCTGTCAACAAACTGTTCAAGATATTGT
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAATG up 0 0


Secondary structure

AACAATATCTTGAACAGTTTGTTGACAGAAGATAGAGAGCACAGGTGATCATACCCAAAAAAGCTTTTGTGTGTGAGCAGTTTTGTGCTCTCTATCTTCTGTCAATGTACTTCTCACCAACTAGC
-------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13
------------------------ACAGAAGATAGAGAGCACAG 	128



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Glycine max GSM543396 TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTTGTCATCA up 1 2


Secondary structure

AGGAAAGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCAAGAAAGGAAATGGCATCTTACTCTTTTGTGCTCTCTAGTCTTCTTGTCATCATCATTTTGCCTCCCCTCT
-------------------TGTTGACAGAAGATAGAGAGC 	40
---------------------TTGACAGAAGATAGAGAGCACA 	54
---------------------TTGACAGAAGATAGAGAGCAC 	17334
---------------------TTGACAGAAGATAGAGAGCA 	147
---------------------TTGACAGAAGATAGAGAGC 	25
----------------------TGACAGAAGATAGAGAGCACA 	271
----------------------TGACAGAAGATAGAGAGCAC 	656
-----------------------GACAGAAGATAGAGAGCAC 	13
------------------------ACAGAAGATAGAGAGCACAG 	128



Overlaps with miRBase pre-miRNAs: gma-MIR156j
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

ACTAGTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAAAAAGCAGCTAGGGAACTCATGAATTGTGCATCTCACTCCTTTGTGCTCTCTATACTTCTGTCATCACCCTTCAGCCTCCCTGTC
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1



Overlaps with miRBase pre-miRNAs: gma-MIR156i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTAAGCTTCTGTCATCC up 2 1


Secondary structure

AGGCATTAGTTGGTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCACATATACATGGAACAGGAATTTAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAAGCTTCTGTCATCCACCTCCACTACCCTCCTT
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1



Overlaps with miRBase pre-miRNAs: gma-MIR156l
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTAGGCTTCTGTCATCC up 2 1


Secondary structure

AAGAAGGAATATTGGGGAGAAGAGGAAGGGAGGATCTAGTTGATAGGGTTGTTGACAGAAGATAGAGAGCACAGATAGTGATATGCATAAAAATATGGAACGGGAAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAGGCTTCTGTCATCCACACCTTCACTGCCCCTCCATTTCTCACAACTCAATCTTCCATTACTC
---------------------------------------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------------------------------------TGACAGAAGATAGAGAGCACA 	6
----------------------------------------------------TGACAGAAGATAGAGAGCAC 	1



Overlaps with miRBase pre-miRNAs: gma-MIR156m
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

GCTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCTTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTCT
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1


Overlaps with: MNEST003451
Overlaps with miRBase pre-miRNAs: gma-MIR156d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAACA up 0 0


Secondary structure

AGCTAGTTGGTGAGAAGTACATTGACAGAAGATAGAGAGCACAAAACTGCTCACACACAAAAGCTTTTTTGGGTATGATCACCTGTGCTCTCTATCTTCTGTCAACAAACTGTTCAAGATATTGT
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1
-----------------------------------------------------------------------------------------CTCTATCTTCTGTCAACAAACTGT 	2
-------------------------------------------------------------------------------------------CTATCTTCTGTCAACAAACTGTTC 	4



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAATG up 0 0


Secondary structure

AACAATATCTTGAACAGTTTGTTGACAGAAGATAGAGAGCACAGGTGATCATACCCAAAAAAGCTTTTGTGTGTGAGCAGTTTTGTGCTCTCTATCTTCTGTCAATGTACTTCTCACCAACTAGC
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Glycine max GSM852280 TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTTGTCATCA up 1 2


Secondary structure

AGGAAAGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCAAGAAAGGAAATGGCATCTTACTCTTTTGTGCTCTCTAGTCTTCTTGTCATCATCATTTTGCCTCCCCTCT
---------------------TTGACAGAAGATAGAGAGCAC 	59
----------------------TGACAGAAGATAGAGAGCACA 	6
----------------------TGACAGAAGATAGAGAGCAC 	1



Overlaps with miRBase pre-miRNAs: gma-MIR156j
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

ACTAGTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAAAAAGCAGCTAGGGAACTCATGAATTGTGCATCTCACTCCTTTGTGCTCTCTATACTTCTGTCATCACCCTTCAGCCTCCCTGTC
-------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9
------------------------ACAGAAGATAGAGAGCACAG 	57



Overlaps with miRBase pre-miRNAs: gma-MIR156i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTAAGCTTCTGTCATCC up 2 1


Secondary structure

AGGCATTAGTTGGTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCACATATACATGGAACAGGAATTTAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAAGCTTCTGTCATCCACCTCCACTACCCTCCTT
-------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9
------------------------ACAGAAGATAGAGAGCACAG 	57



Overlaps with miRBase pre-miRNAs: gma-MIR156l
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTAGGCTTCTGTCATCC up 2 1


Secondary structure

AAGAAGGAATATTGGGGAGAAGAGGAAGGGAGGATCTAGTTGATAGGGTTGTTGACAGAAGATAGAGAGCACAGATAGTGATATGCATAAAAATATGGAACGGGAAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAGGCTTCTGTCATCCACACCTTCACTGCCCCTCCATTTCTCACAACTCAATCTTCCATTACTC
-------------------------------------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------------------------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------------------------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------------------------------------TTGACAGAAGATAGAGAGCA 	27
---------------------------------------------------TTGACAGAAGATAGAGAGC 	5
----------------------------------------------------TGACAGAAGATAGAGAGCACA 	78
----------------------------------------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------------------------------------GACAGAAGATAGAGAGCAC 	9
------------------------------------------------------ACAGAAGATAGAGAGCACAG 	57



Overlaps with miRBase pre-miRNAs: gma-MIR156m
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

GCTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCTTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTCT
-------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9
------------------------ACAGAAGATAGAGAGCACAG 	57


Overlaps with: MNEST003451
Overlaps with miRBase pre-miRNAs: gma-MIR156d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAACA up 0 0


Secondary structure

AGCTAGTTGGTGAGAAGTACATTGACAGAAGATAGAGAGCACAAAACTGCTCACACACAAAAGCTTTTTTGGGTATGATCACCTGTGCTCTCTATCTTCTGTCAACAAACTGTTCAAGATATTGT
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAATG up 0 0


Secondary structure

AACAATATCTTGAACAGTTTGTTGACAGAAGATAGAGAGCACAGGTGATCATACCCAAAAAAGCTTTTGTGTGTGAGCAGTTTTGTGCTCTCTATCTTCTGTCAATGTACTTCTCACCAACTAGC
-------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9
------------------------ACAGAAGATAGAGAGCACAG 	57



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Glycine max GSM543394 TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTTGTCATCA up 1 2


Secondary structure

AGGAAAGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCAAGAAAGGAAATGGCATCTTACTCTTTTGTGCTCTCTAGTCTTCTTGTCATCATCATTTTGCCTCCCCTCT
-------------------TGTTGACAGAAGATAGAGAGC 	6
---------------------TTGACAGAAGATAGAGAGCACA 	12
---------------------TTGACAGAAGATAGAGAGCAC 	6161
---------------------TTGACAGAAGATAGAGAGCA 	27
---------------------TTGACAGAAGATAGAGAGC 	5
----------------------TGACAGAAGATAGAGAGCACA 	78
----------------------TGACAGAAGATAGAGAGCAC 	171
-----------------------GACAGAAGATAGAGAGCAC 	9
------------------------ACAGAAGATAGAGAGCACAG 	57



Overlaps with miRBase pre-miRNAs: gma-MIR156j
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

ACTAGTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAAAAAGCAGCTAGGGAACTCATGAATTGTGCATCTCACTCCTTTGTGCTCTCTATACTTCTGTCATCACCCTTCAGCCTCCCTGTC
-------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45
------------------------ACAGAAGATAGAGAGCACAG 	319
-------------------------------------------------------------------------------------------------------------GTGCTCTCTATACTTCTGTCA 	24
---------------------------------------------------------------------------------------------------------------GCTCTCTATACTTCTGTCATC 	5



Overlaps with miRBase pre-miRNAs: gma-MIR156i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTAAGCTTCTGTCATCC up 2 1


Secondary structure

AGGCATTAGTTGGTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCACATATACATGGAACAGGAATTTAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAAGCTTCTGTCATCCACCTCCACTACCCTCCTT
-------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45
------------------------ACAGAAGATAGAGAGCACAG 	319



Overlaps with miRBase pre-miRNAs: gma-MIR156l
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTAGGCTTCTGTCATCC up 2 1


Secondary structure

AAGAAGGAATATTGGGGAGAAGAGGAAGGGAGGATCTAGTTGATAGGGTTGTTGACAGAAGATAGAGAGCACAGATAGTGATATGCATAAAAATATGGAACGGGAAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAGGCTTCTGTCATCCACACCTTCACTGCCCCTCCATTTCTCACAACTCAATCTTCCATTACTC
-------------------------------------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------------------------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------------------------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------------------------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------------------------------------TTGACAGAAGATAGAGAGCA 	65
---------------------------------------------------TTGACAGAAGATAGAGAGC 	10
----------------------------------------------------TGACAGAAGATAGAGAGCACA 	129
----------------------------------------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------------------------------------GACAGAAGATAGAGAGCAC 	45
------------------------------------------------------ACAGAAGATAGAGAGCACAG 	319



Overlaps with miRBase pre-miRNAs: gma-MIR156m
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

GCTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCTTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTCT
-------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45
------------------------ACAGAAGATAGAGAGCACAG 	319
---------------------------------------------------------------------------------------------------------------GTGCTCTCTATACTTCTGTCA 	24
-----------------------------------------------------------------------------------------------------------------GCTCTCTATACTTCTGTCATC 	5


Overlaps with: MNEST003451
Overlaps with miRBase pre-miRNAs: gma-MIR156d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
26 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAACA up 0 0


Secondary structure

AGCTAGTTGGTGAGAAGTACATTGACAGAAGATAGAGAGCACAAAACTGCTCACACACAAAAGCTTTTTTGGGTATGATCACCTGTGCTCTCTATCTTCTGTCAACAAACTGTTCAAGATATTGT
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
---------------------TTGACAGAAGATAGAGAGCACAA 	6
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
27 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAATG up 0 0


Secondary structure

AACAATATCTTGAACAGTTTGTTGACAGAAGATAGAGAGCACAGGTGATCATACCCAAAAAAGCTTTTGTGTGTGAGCAGTTTTGTGCTCTCTATCTTCTGTCAATGTACTTCTCACCAACTAGC
-------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45
------------------------ACAGAAGATAGAGAGCACAG 	319



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
28 Glycine max GSM543393 TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTTGTCATCA up 1 2


Secondary structure

AGGAAAGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCAAGAAAGGAAATGGCATCTTACTCTTTTGTGCTCTCTAGTCTTCTTGTCATCATCATTTTGCCTCCCCTCT
-------------------TGTTGACAGAAGATAGAGAGCACA 	11
-------------------TGTTGACAGAAGATAGAGAGC 	17
---------------------TTGACAGAAGATAGAGAGCACA 	57
---------------------TTGACAGAAGATAGAGAGCAC 	13143
---------------------TTGACAGAAGATAGAGAGCA 	65
---------------------TTGACAGAAGATAGAGAGC 	10
----------------------TGACAGAAGATAGAGAGCACA 	129
----------------------TGACAGAAGATAGAGAGCAC 	2053
-----------------------GACAGAAGATAGAGAGCAC 	45
------------------------ACAGAAGATAGAGAGCACAG 	319



Overlaps with miRBase pre-miRNAs: gma-MIR156j
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
29 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

ACTAGTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAAAAAGCAGCTAGGGAACTCATGAATTGTGCATCTCACTCCTTTGTGCTCTCTATACTTCTGTCATCACCCTTCAGCCTCCCTGTC
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9



Overlaps with miRBase pre-miRNAs: gma-MIR156i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
30 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTAAGCTTCTGTCATCC up 2 1


Secondary structure

AGGCATTAGTTGGTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCACATATACATGGAACAGGAATTTAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAAGCTTCTGTCATCCACCTCCACTACCCTCCTT
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9



Overlaps with miRBase pre-miRNAs: gma-MIR156l
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
31 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTAGGCTTCTGTCATCC up 2 1


Secondary structure

AAGAAGGAATATTGGGGAGAAGAGGAAGGGAGGATCTAGTTGATAGGGTTGTTGACAGAAGATAGAGAGCACAGATAGTGATATGCATAAAAATATGGAACGGGAAAGCAATTGCATCTCACTCCTTTGTGCTCTCTAGGCTTCTGTCATCCACACCTTCACTGCCCCTCCATTTCTCACAACTCAATCTTCCATTACTC
---------------------------------------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------------------------------------TGACAGAAGATAGAGAGCAC 	9



Overlaps with miRBase pre-miRNAs: gma-MIR156m
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
32 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTATACTTCTGTCATCA up 1 1


Secondary structure

GCTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCTTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTCT
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9


Overlaps with: MNEST003451
Overlaps with miRBase pre-miRNAs: gma-MIR156d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
33 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAACA up 0 0


Secondary structure

AGCTAGTTGGTGAGAAGTACATTGACAGAAGATAGAGAGCACAAAACTGCTCACACACAAAAGCTTTTTTGGGTATGATCACCTGTGCTCTCTATCTTCTGTCAACAAACTGTTCAAGATATTGT
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
34 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTATCTTCTGTCAATG up 0 0


Secondary structure

AACAATATCTTGAACAGTTTGTTGACAGAAGATAGAGAGCACAGGTGATCATACCCAAAAAAGCTTTTGTGTGTGAGCAGTTTTGTGCTCTCTATCTTCTGTCAATGTACTTCTCACCAACTAGC
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
35 Glycine max GSM543395 TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTTGTCATCA up 1 2


Secondary structure

AGGAAAGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACAGATGATGAAATGCAAGAAAGGAAATGGCATCTTACTCTTTTGTGCTCTCTAGTCTTCTTGTCATCATCATTTTGCCTCCCCTCT
---------------------TTGACAGAAGATAGAGAGCAC 	75
----------------------TGACAGAAGATAGAGAGCAC 	9



Overlaps with miRBase pre-miRNAs: gma-MIR156j
HuntMi prediction: true miRNA