miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTGAGGTGTTTCTACAGGCTA

selected species: Physcomitrella patens



25 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Physcomitrella patens GSM115097 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAAGCG 	1
----------------------GACTGTAGAAACACCTGAAGC 	88
----------------------GACTGTAGAAACACCTGAAG 	5
----------------------GACTGTAGAAACACCTGAA 	2
------------------------CTGTAGAAACACCTGAAGC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACTCTTGAGGTGTTTCT 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGAGGTGTTTCTACAGGCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	7
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACAT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	864
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	99
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	10
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	52


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Physcomitrella patens GSM115097 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----------TAGACTGTAGAAACACCTGA 	3
----------TAGACTGTAGAAACACCTGAAG 	2
------------GACTGTAGAAACACCTGAAGC 	88
------------GACTGTAGAAACACCTGAAG 	5
------------GACTGTAGAAACACCTGAA 	2
--------------CTGTAGAAACACCTGAAGC 	1
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTTTC 	2
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	5
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTC 	3
-------------------------------------------------------------------------------------------------------------------CAGTAACTTGAGGTGTTTCT 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	7
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	864
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	99
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTACT 	7
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	10
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	52


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Physcomitrella patens GSM115097 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
------------GACTGTAGAAACACCTGAAG 	5
------------GACTGTAGAAACACCTGAA 	2
------------------------------------------------------------------------------------------------------AACCGGTGCAAGCTTCAAGCT 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTCTAC 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTCT 	9
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	104
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	169
---------------------------------------------------------------------------------------------------------------------CAAGCTCTTGAGGTGTTTCT 	1
-----------------------------------------------------------------------------------------------------------------------AGCTCTTGAGGTGTTTCTACA 	1
--------------------------------------------------------------------------------------------------------------------------TCTTGAGGTGTTTCTACAGGCT 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	7
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACAT 	1
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	864
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	99
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	10
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	52


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Physcomitrella patens GSM313212 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAA 	3
----------------------GACTGTAGAAACACCTGAAGC 	14
-------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAACTCTTGAGGTGTTTC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACTCTTGAGGTGTTTCT 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTAC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	26


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Physcomitrella patens GSM313212 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----CATACATAGACTGTAGAAAC 	1
----------TAGACTGTAGAAACACCTGA 	1
----------TAGACTGTAGAAACACCTGAAG 	1
----------TAGACTGTAGAAACACCTGAA 	3
------------GACTGTAGAAACACCTGAA 	3
------------GACTGTAGAAACACCTGAAGC 	14
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTT 	1
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTTTC 	1
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTAC 	1
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	2
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	5
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	26
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTACT 	1


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Physcomitrella patens GSM115095 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAAGCG 	1
----------------------GACTGTAGAAACACCTGAAGC 	6
--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGAGGTGTTTCTACAGGCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	34
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	3


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Physcomitrella patens GSM115095 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
------------GACTGTAGAAACACCTGAAGC 	6
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	34
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	3


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Physcomitrella patens GSM115095 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	5
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	11
--------------------------------------------------------------------------------------------------------------------------TCTTGAGGTGTTTCTACAGGCT 	1
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	34
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	3


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Physcomitrella patens GSM313213 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAAGC 	14
----------------------GACTGTAGAAACACCTGAAG 	3
----------------------GACTGTAGAAACACCTGAA 	1
-----------------------ACTGTAGAAACACCTGAAG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAACTCTTGAGGTGTTTC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACTCTTGAGGTGTTTCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	26
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	1


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Physcomitrella patens GSM313213 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----------TAGACTGTAGAAACACCTGA 	1
----------TAGACTGTAGAAACACCTGAAG 	2
----------TAGACTGTAGAAACACCTGAA 	1
-----------AGACTGTAGAAACACCTGAAG 	1
------------GACTGTAGAAACACCTGAAGCT 	1
------------GACTGTAGAAACACCTGAAGC 	14
------------GACTGTAGAAACACCTGAAG 	3
------------GACTGTAGAAACACCTGAA 	1
-------------ACTGTAGAAACACCTGAAG 	1
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTC 	1
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	2
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	2
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	26
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	4
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	1


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Physcomitrella patens GSM313215 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAA 	3
----------------------GACTGTAGAAACACCTGAAGC 	318
----------------------GACTGTAGAAACACCTGAAG 	42
-----------------------ACTGTAGAAACACCTGAAGC 	1
-----------------------ACTGTAGAAACACCTGAAG 	1
------------------------CTGTAGAAACACCTGAAGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	692
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	131
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	16
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	4


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Physcomitrella patens GSM313215 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----------TAGACTGTAGAAACACCTGA 	4
----------TAGACTGTAGAAACACCTGAA 	1
----------TAGACTGTAGAAACACCTGAAG 	1
------------GACTGTAGAAACACCTGAA 	3
------------GACTGTAGAAACACCTGAAGC 	318
------------GACTGTAGAAACACCTGAAG 	42
------------GACTGTAGAAACACCTGAAGCT 	1
-------------ACTGTAGAAACACCTGAAGC 	1
-------------ACTGTAGAAACACCTGAAG 	1
--------------CTGTAGAAACACCTGAAGC 	1
---------------TGTAGAAACACCTGAAGCTA 	1
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTTTC 	2
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	4
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTC 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	3
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	692
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	131
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	16
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTACT 	1
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	4
--------------------------------------------------------------------------------------------------------------------------------TGTTTCTACAGGCTACTTATG 	1
----------------------------------------------------------------------------------------------------------------------------------TTTCTACAGGCTACTTATGCT 	3


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Physcomitrella patens GSM313215 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
------------GACTGTAGAAACACCTGAA 	3
------------GACTGTAGAAACACCTGAAGT 	94
------------GACTGTAGAAACACCTGAAG 	42
-------------ACTGTAGAAACACCTGAAGTG 	1
-------------ACTGTAGAAACACCTGAAG 	1
-----------------TAGAAACACCTGAAGTGACTG 	1
--------------------AAACACCTGAAGTGACTGAAGT 	1
--------------------AAACACCTGAAGTGACTGAAG 	3
---------------------AACACCTGAAGTGACTGAAGT 	2
------------------------------------------------------------------------------------------------------AACCGGTGCAAGCTTCAAGCT 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTT 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	28
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	41
----------------------------------------------------------------------------------------------------------------------AAGCTCTTGAGGTGTTTCT 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	3
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	3
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	692
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	131
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	3
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	16
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	4


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Physcomitrella patens GSM115096 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
--------------------TGGACTGTAGAAACACCTGAAG 	1
---------------------GGACTGTAGAAACACCTGAAGC 	1
----------------------GACTGTAGAAACACCTGAAG 	20
----------------------GACTGTAGAAACACCTGAA 	10
----------------------GACTGTAGAAACACCTGAAGC 	137
------------------------CTGTAGAAACACCTGAAGC 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACTCTTGAGGTGTTTCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	365
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	68
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	18
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	43


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Physcomitrella patens GSM115096 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
------------GACTGTAGAAACACCTGAAG 	20
------------GACTGTAGAAACACCTGAA 	10
------------GACTGTAGAAACACCTGAAGC 	137
--------------CTGTAGAAACACCTGAAGC 	2
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTTTC 	1
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	5
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	4
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	5
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	1
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	365
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	68
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTACT 	9
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	18
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	43
--------------------------------------------------------------------------------------------------------------------------------TGTTTCTACAGGCTACTTAT 	1
----------------------------------------------------------------------------------------------------------------------------------TTTCTACAGGCTACTTATGCT 	1


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Physcomitrella patens GSM115096 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
----------TGGACTGTAGAAACACCTGAAG 	1
------------GACTGTAGAAACACCTGAAGT 	4
------------GACTGTAGAAACACCTGAAG 	20
------------GACTGTAGAAACACCTGAA 	10
--------------CTGTAGAAACACCTGAAGT 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTCT 	5
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	37
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	64
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTC 	1
---------------------------------------------------------------------------------------------------------------------CAAGCTCTTGAGGTGTTTCT 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCT 	4
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	5
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	1
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	365
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	68
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	18
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	43


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Physcomitrella patens GSM313216 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAAGCG 	3
----------------------GACTGTAGAAACACCTGAA 	10
----------------------GACTGTAGAAACACCTGAAGC 	118
----------------------GACTGTAGAAACACCTGAAGCGA 	1
----------------------GACTGTAGAAACACCTGAAG 	25
-----------------------ACTGTAGAAACACCTGAAGC 	1
-----------------------ACTGTAGAAACACCTGAAG 	1
------------------------CTGTAGAAACACCTGAAGC 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	11
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	12
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	83
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	410
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	15
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	5


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Physcomitrella patens GSM313216 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----------TAGACTGTAGAAACACCTGA 	7
----------TAGACTGTAGAAACACCTGAAG 	3
----------TAGACTGTAGAAACACCTGAA 	1
------------GACTGTAGAAACACCTGAAGCT 	2
------------GACTGTAGAAACACCTGAA 	10
------------GACTGTAGAAACACCTGAAGC 	118
------------GACTGTAGAAACACCTGAAG 	25
-------------ACTGTAGAAACACCTGAAGC 	1
-------------ACTGTAGAAACACCTGAAG 	1
--------------CTGTAGAAACACCTGAAGC 	3
---------------------AACACCTGAAGCTATTGATC 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	11
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACTT 	1
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	12
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	83
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	410
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	15
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	2
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	5


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Physcomitrella patens GSM313216 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
------TATCTGGACTGTAGAAACACC 	1
------------GACTGTAGAAACACCTGAA 	10
------------GACTGTAGAAACACCTGAAGT 	13
------------GACTGTAGAAACACCTGAAG 	25
-------------ACTGTAGAAACACCTGAAGT 	1
-------------ACTGTAGAAACACCTGAAG 	1
--------------------AAACACCTGAAGTGACTGAAG 	1
---------------------AACACCTGAAGTGACTGAAGT 	4
------------------------------------------------------------------------------------------------------AACCGGTGCAAGCTTCAAGC 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	12
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	15
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTC 	2
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	2
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	11
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	12
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	83
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	2
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	410
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	15
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	2
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	5


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Physcomitrella patens GSM313214 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAA 	5
----------------------GACTGTAGAAACACCTGAAGC 	435
----------------------GACTGTAGAAACACCTGAAG 	56
----------------------GACTGTAGAAACACCTGAAGCG 	2
-----------------------ACTGTAGAAACACCTGAAGC 	10
-----------------------ACTGTAGAAACACCTGAAG 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	9
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	774
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	150
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	23
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	3
------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGTGTTTCTACAGGCTA 	2


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Physcomitrella patens GSM313214 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----CATACATAGACTGTAGAAACA 	3
----------TAGACTGTAGAAACACCTGAAG 	8
----------TAGACTGTAGAAACACCTGA 	20
----------TAGACTGTAGAAACACCTGAA 	4
----------TAGACTGTAGAAACACCTGAAGC 	1
-----------AGACTGTAGAAACACCTGAAG 	3
-----------AGACTGTAGAAACACCTGA 	2
-----------AGACTGTAGAAACACCTGAAGCT 	1
------------GACTGTAGAAACACCTGAA 	5
------------GACTGTAGAAACACCTGAAGC 	435
------------GACTGTAGAAACACCTGAAG 	56
------------GACTGTAGAAACACCTGAAGCT 	3
-------------ACTGTAGAAACACCTGAAGC 	10
-------------ACTGTAGAAACACCTGAAG 	3
-----------------------------------------------------------------------------------------------------------------ATCAGTAACTTGAGGTGTTTC 	2
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTC 	3
------------------------------------------------------------------------------------------------------------------TCAGTAACTTGAGGTGTTTCT 	5
--------------------------------------------------------------------------------------------------------------------AGTAACTTGAGGTGTTTCT 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	9
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	774
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	150
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	23
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	3
----------------------------------------------------------------------------------------------------------------------------GAGGTGTTTCTACAGGCTA 	2
--------------------------------------------------------------------------------------------------------------------------------TGTTTCTACAGGCTACTTAT 	1
--------------------------------------------------------------------------------------------------------------------------------TGTTTCTACAGGCTACTTATG 	2
----------------------------------------------------------------------------------------------------------------------------------TTTCTACAGGCTACTTATGCT 	1


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Physcomitrella patens GSM313214 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
------------GACTGTAGAAACACCTGAA 	5
------------GACTGTAGAAACACCTGAAGT 	98
------------GACTGTAGAAACACCTGAAG 	56
-------------ACTGTAGAAACACCTGAAG 	3
---------------------AACACCTGAAGTGACTGAAGT 	7
---------------------AACACCTGAAGTGACTGAAG 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	24
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTCT 	1
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTT 	2
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	24
----------------------------------------------------------------------------------------------------------------------AAGCTCTTGAGGTGTTTCT 	1
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	3
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	9
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	774
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	150
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTACA 	1
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	23
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	3
------------------------------------------------------------------------------------------------------------------------------GAGGTGTTTCTACAGGCTA 	2


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Physcomitrella patens GSM313217 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

GCAATTGTTGTCGTCATATATGGACTGTAGAAACACCTGAAGCGAGTGAGGACCATCCGATTCTAGCCATGGAAACAGATAAGAGCTCATGTCTGGGTTCCTGTTTCTGTGATGCTTTTGAGGTTTGCGCATGAGATAGCATCGGTTAGGCTTCAAACTCTTGAGGTGTTTCTACAGGCTACATATGATTGATAGCTTTG
----------------------GACTGTAGAAACACCTGAAGCG 	1
----------------------GACTGTAGAAACACCTGAA 	5
----------------------GACTGTAGAAACACCTGAAGC 	121
----------------------GACTGTAGAAACACCTGAAG 	22
-----------------------ACTGTAGAAACACCTGAAGC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------TCAAACTCTTGAGGTGTTTCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	14
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	11
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	73
----------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	394
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	19
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	8


Overlaps with: MNEST039528 MNEST051430
Overlaps with miRBase pre-miRNAs: ppt-MIR537a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
24 Physcomitrella patens GSM313217 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGC down 2 0


Secondary structure

TTATCATACATAGACTGTAGAAACACCTGAAGCTATTGATCTCTACTTTGTTGTAACCGATCTTTATGGAAAGTGCACGAAAATGTGTATGCTGTGATCGCACGATTGGTGACATCAGTAACTTGAGGTGTTTCTACAGGCTACTTATGCTT
----------TAGACTGTAGAAACACCTGA 	6
----------TAGACTGTAGAAACACCTGAAG 	3
------------GACTGTAGAAACACCTGAAGCT 	6
------------GACTGTAGAAACACCTGAA 	5
------------GACTGTAGAAACACCTGAAGC 	121
------------GACTGTAGAAACACCTGAAG 	22
-------------ACTGTAGAAACACCTGAAGC 	1
---------------TGTAGAAACACCTGAAGCTAT 	1
------------------------------------------------------------------------------------------------------------------------ACTTGAGGTGTTTCTACAGGC 	1
-------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	4
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	14
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	11
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	73
--------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	394
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	19
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
---------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	8


Overlaps with: MNEST039531 MNEST051433
Overlaps with miRBase pre-miRNAs: ppt-MIR537d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
25 Physcomitrella patens GSM313217 TTGAGGTGTTTCTACAGGCTA GACTGTAGAAACACCTGAAGT down 2 0


Secondary structure

TCCTCATATCTGGACTGTAGAAACACCTGAAGTGACTGAAGTTAGTCCGGTTTAGGTATGAGAATGATTGGAGCACCTCTCCAGATGTTCCAGATGTAATGAAACCGGTGCAAGCTTCAAGCTCTTGAGGTGTTTCTACAGGCTACATATGATA
------------GACTGTAGAAACACCTGAA 	5
------------GACTGTAGAAACACCTGAAGT 	13
------------GACTGTAGAAACACCTGAAG 	22
-------------ACTGTAGAAACACCTGAAGT 	1
-----------------TAGAAACACCTGAAGTGACT 	1
------------------AGAAACACCTGAAGTGACTGAA 	1
--------------------AAACACCTGAAGTGACTGAA 	1
--------------------AAACACCTGAAGTGACTGAAG 	5
------------------------------------------------------------------------------------------------------AACCGGTGCAAGCTTCAAG 	1
-------------------------------------------------------------------------------------------------------------------TTCAAGCTCTTGAGGTGTTTC 	15
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCT 	11
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTCTAC 	1
--------------------------------------------------------------------------------------------------------------------TCAAGCTCTTGAGGTGTTTC 	2
---------------------------------------------------------------------------------------------------------------------------CTTGAGGTGTTTCTACAGGCTA 	4
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGC 	14
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTAC 	11
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCT 	73
----------------------------------------------------------------------------------------------------------------------------TTGAGGTGTTTCTACAGGCTA 	394
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTA 	19
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCTAC 	1
-----------------------------------------------------------------------------------------------------------------------------TGAGGTGTTTCTACAGGCT 	8


Overlaps with: MNEST039529 MNEST039530 MNEST051431 MNEST051432
Overlaps with miRBase pre-miRNAs: ppt-MIR537b ppt-MIR537c
HuntMi prediction: true miRNA