miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTGCTGTGCACTACTTAGTAC

selected species: Physcomitrella patens



18 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Physcomitrella patens GSM115097 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
------------------------CGGCATCTTGCTGTGCACTAC 	3
------------------------CGGCATCTTGCTGTGCACTA 	2
---------------------------CATCTTGCTGTGCACTACTTA 	3
----------------------------ATCTTGCTGTGCACTACTTAGT 	4
----------------------------ATCTTGCTGTGCACTACTTAG 	13
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	2
-----------------------------TCTTGCTGTGCACTACTTAGTACG 	2
-----------------------------TCTTGCTGTGCACTACTTAGT 	109
-----------------------------TCTTGCTGTGCACTACTTAG 	21
------------------------------CTTGCTGTGCACTACTTAGTAC 	4
------------------------------CTTGCTGTGCACTACTTAGT 	1
-------------------------------TTGCTGTGCACTACTTAGTACG 	226
-------------------------------TTGCTGTGCACTACTTAGT 	13
-------------------------------TTGCTGTGCACTACTTAGTACGC 	1
-------------------------------TTGCTGTGCACTACTTAGTAC 	7396
-------------------------------TTGCTGTGCACTACTTAGTA 	363
--------------------------------TGCTGTGCACTACTTAGTACG 	157
--------------------------------TGCTGTGCACTACTTAGTAC 	259
--------------------------------TGCTGTGCACTACTTAGTA 	11
---------------------------------GCTGTGCACTACTTAGTAC 	3
-----------------------------------TGTGCACTACTTAGTACGCG 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGC 	1
---------------------------------------------------------------------------------------------------------------------------GGCGTGCTGAGTAGTGCACAG 	1
-----------------------------------------------------------------------------------------------------------------------------CGTGCTGAGTAGTGCACAGCAATA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	11
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATAT 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATGC 	2
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	27
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGCT 	2


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Physcomitrella patens GSM115097 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	1
----------------------------GTATTGCTGTGCACTACTTAG 	1
------------------------------ATTGCTGTGCACTACTTAGTAC 	4
-------------------------------TTGCTGTGCACTACTTAGTACA 	517
-------------------------------TTGCTGTGCACTACTTAGT 	13
-------------------------------TTGCTGTGCACTACTTAGTAC 	7396
-------------------------------TTGCTGTGCACTACTTAGTA 	363
--------------------------------TGCTGTGCACTACTTAGTAC 	259
--------------------------------TGCTGTGCACTACTTAGTACAC 	1
--------------------------------TGCTGTGCACTACTTAGTACA 	118
--------------------------------TGCTGTGCACTACTTAGTA 	11
---------------------------------GCTGTGCACTACTTAGTACA 	1
---------------------------------GCTGTGCACTACTTAGTAC 	3
----------------------------------CTGTGCACTACTTAGTACA 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	21
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	4
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	10
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	589
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	125
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	2
---------------------------------------------------------------------------------------------------------------------------------TAGGCAGTGCACAGCGATA 	1


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Physcomitrella patens GSM313212 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
----------------------TCCGGCATCTTGCTGTGCACT 	1
---------------------------CATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTAGTAC 	1
----------------------------ATCTTGCTGTGCACTACTTAGTACG 	1
----------------------------ATCTTGCTGTGCACTACTTAG 	90
----------------------------ATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTAGT 	11
-----------------------------TCTTGCTGTGCACTACTTAGT 	70
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	2
-----------------------------TCTTGCTGTGCACTACTTAG 	33
-----------------------------TCTTGCTGTGCACTACTTA 	1
------------------------------CTTGCTGTGCACTACTTAGTA 	1
------------------------------CTTGCTGTGCACTACTTAGTACG 	2
------------------------------CTTGCTGTGCACTACTTAGTAC 	8
------------------------------CTTGCTGTGCACTACTTAGT 	2
-------------------------------TTGCTGTGCACTACTTAGTAC 	5033
-------------------------------TTGCTGTGCACTACTTAGTA 	367
-------------------------------TTGCTGTGCACTACTTAGTACGC 	10
-------------------------------TTGCTGTGCACTACTTAGTACG 	554
-------------------------------TTGCTGTGCACTACTTAGT 	7
--------------------------------TGCTGTGCACTACTTAGTA 	17
--------------------------------TGCTGTGCACTACTTAGTACGCG 	5
--------------------------------TGCTGTGCACTACTTAGTACGC 	1
--------------------------------TGCTGTGCACTACTTAGTAC 	222
--------------------------------TGCTGTGCACTACTTAGTACG 	637
---------------------------------GCTGTGCACTACTTAGTAC 	21
---------------------------------GCTGTGCACTACTTAGTACGCG 	1
---------------------------------GCTGTGCACTACTTAGTACG 	5
-----------------------------------TGTGCACTACTTAGTACGCG 	1
--------------------------------------------------ACGCGCGTAGTTGCAGGCATT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCTGA 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCT 	6
------------------------------------------------------------------------------------------------------------------------------GTGCTGAGTAGTGCACAGCAA 	1
------------------------------------------------------------------------------------------------------------------------------GTGCTGAGTAGTGCACAGCAATA 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	8
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATAT 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	83
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAAT 	2
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	5
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATG 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	14
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGCT 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGC 	1
---------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCAATATGCTGGG 	6


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Physcomitrella patens GSM313212 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	1
------------------------CGGCGTATTGCTGTGCACTAC 	1
----------------------------GTATTGCTGTGCACTACTTAG 	4
-----------------------------TATTGCTGTGCACTACTTAGTA 	1
------------------------------ATTGCTGTGCACTACTTAGTAC 	1
-------------------------------TTGCTGTGCACTACTTAGTACAC 	6
-------------------------------TTGCTGTGCACTACTTAGTAC 	5033
-------------------------------TTGCTGTGCACTACTTAGTA 	367
-------------------------------TTGCTGTGCACTACTTAGTACA 	1768
-------------------------------TTGCTGTGCACTACTTAGT 	7
-------------------------------TTGCTGTGCACTACTTAGTACACGC 	1
--------------------------------TGCTGTGCACTACTTAGTA 	17
--------------------------------TGCTGTGCACTACTTAGTACA 	76
--------------------------------TGCTGTGCACTACTTAGTAC 	222
--------------------------------TGCTGTGCACTACTTAGTACAC 	2
---------------------------------GCTGTGCACTACTTAGTAC 	21
---------------------------------GCTGTGCACTACTTAGTACA 	6
----------------------------------------ACTACTTAGTACACGCGTATCG 	1
----------------------------------------ACTACTTAGTACACGCGTATCGGTTT 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	81
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGA 	4
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	21
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	106
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	764
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	81
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	1
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATAT 	1
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	5
---------------------------------------------------------------------------------------------------------------------------------TAGGCAGTGCACAGCGATA 	5
--------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCGATATGCTGGG 	1
----------------------------------------------------------------------------------------------------------------------------------------TGCACAGCGATATGCTGGGTAT 	1
----------------------------------------------------------------------------------------------------------------------------------------TGCACAGCGATATGCTGGGTA 	2


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Physcomitrella patens GSM115095 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
---------------------------CATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTAGTACG 	1
----------------------------ATCTTGCTGTGCACTACTTAGT 	1
----------------------------ATCTTGCTGTGCACTACTTAG 	1
-----------------------------TCTTGCTGTGCACTACTTAGT 	8
-----------------------------TCTTGCTGTGCACTACTTAG 	3
------------------------------CTTGCTGTGCACTACTTAGTAC 	1
------------------------------CTTGCTGTGCACTACTTAG 	1
-------------------------------TTGCTGTGCACTACTTAGTACG 	14
-------------------------------TTGCTGTGCACTACTTAGT 	5
-------------------------------TTGCTGTGCACTACTTAGTAC 	763
-------------------------------TTGCTGTGCACTACTTAGTA 	83
--------------------------------TGCTGTGCACTACTTAGTACGC 	1
--------------------------------TGCTGTGCACTACTTAGTACG 	22
--------------------------------TGCTGTGCACTACTTAGTAC 	20
--------------------------------TGCTGTGCACTACTTAGTA 	3
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATGC 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	6
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGCT 	1


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Physcomitrella patens GSM115095 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
------------------------------ATTGCTGTGCACTACTTAGTAC 	1
-------------------------------TTGCTGTGCACTACTTAGTACA 	278
-------------------------------TTGCTGTGCACTACTTAGT 	5
-------------------------------TTGCTGTGCACTACTTAGTAC 	763
-------------------------------TTGCTGTGCACTACTTAGTA 	83
--------------------------------TGCTGTGCACTACTTAGTAC 	20
--------------------------------TGCTGTGCACTACTTAGTACA 	35
--------------------------------TGCTGTGCACTACTTAGTA 	3
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	2
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	2
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	50
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	10
----------------------------------------------------------------------------------------------------------------------------------AGGCAGTGCACAGCGATATGC 	1


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Physcomitrella patens GSM313213 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
---------------------------CATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTAG 	75
----------------------------ATCTTGCTGTGCACTACTTA 	2
----------------------------ATCTTGCTGTGCACTACTTAGT 	8
-----------------------------TCTTGCTGTGCACTACTTAGT 	89
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	1
-----------------------------TCTTGCTGTGCACTACTTAGTACG 	1
-----------------------------TCTTGCTGTGCACTACTTAG 	37
------------------------------CTTGCTGTGCACTACTTAGTA 	1
------------------------------CTTGCTGTGCACTACTTAGTACG 	1
------------------------------CTTGCTGTGCACTACTTAGTAC 	6
-------------------------------TTGCTGTGCACTACTTAGTACGCGCG 	1
-------------------------------TTGCTGTGCACTACTTAGTAC 	5345
-------------------------------TTGCTGTGCACTACTTAGTA 	385
-------------------------------TTGCTGTGCACTACTTAGTACGC 	5
-------------------------------TTGCTGTGCACTACTTAGTACG 	579
-------------------------------TTGCTGTGCACTACTTAGT 	9
--------------------------------TGCTGTGCACTACTTAGTA 	11
--------------------------------TGCTGTGCACTACTTAGTACGCG 	6
--------------------------------TGCTGTGCACTACTTAGTACG 	760
--------------------------------TGCTGTGCACTACTTAGTACGC 	2
--------------------------------TGCTGTGCACTACTTAGTAC 	272
---------------------------------GCTGTGCACTACTTAGTACG 	8
---------------------------------GCTGTGCACTACTTAGTAC 	27
-----------------------------------TGTGCACTACTTAGTACGCG 	1
------------------------------------------------GTACGCGCGTAGTTGCAGGCA 	1
------------------------------------------------GTACGCGCGTAGTTGCAGGCATT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCTGA 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTG 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCT 	5
--------------------------------------------------------------------------------------------------------------------TTCAACTGGCGTGCTGAGTAG 	1
----------------------------------------------------------------------------------------------------------------------------GCGTGCTGAGTAGTGCACAGCA 	1
-----------------------------------------------------------------------------------------------------------------------------CGTGCTGAGTAGTGCACAGCAATA 	1
------------------------------------------------------------------------------------------------------------------------------GTGCTGAGTAGTGCACAGCAATA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	5
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	78
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCA 	5
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAA 	5
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	22
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGCT 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGCT 	1
--------------------------------------------------------------------------------------------------------------------------------------TAGTGCACAGCAATATGCTG 	1
---------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCAATATGCTGGG 	11


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Physcomitrella patens GSM313213 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
---------------------TTCCGGCGTATTGCTGTGCAC 	1
----------------------TCCGGCGTATTGCTGTGCACT 	1
----------------------------GTATTGCTGTGCACTACTTAG 	2
-----------------------------TATTGCTGTGCACTACTTAGT 	2
------------------------------ATTGCTGTGCACTACTTAGTAC 	1
-------------------------------TTGCTGTGCACTACTTAGTACAC 	5
-------------------------------TTGCTGTGCACTACTTAGTAC 	5345
-------------------------------TTGCTGTGCACTACTTAGTA 	385
-------------------------------TTGCTGTGCACTACTTAGT 	9
-------------------------------TTGCTGTGCACTACTTAGTACA 	1889
--------------------------------TGCTGTGCACTACTTAGTA 	11
--------------------------------TGCTGTGCACTACTTAGTAC 	272
--------------------------------TGCTGTGCACTACTTAGTACA 	83
---------------------------------GCTGTGCACTACTTAGTACA 	5
---------------------------------GCTGTGCACTACTTAGTAC 	27
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGA 	4
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	91
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	33
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	95
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	108
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	733
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATAT 	3
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	1
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	6
---------------------------------------------------------------------------------------------------------------------------------TAGGCAGTGCACAGCGATA 	3
--------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCGATATGCTGGG 	4


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Physcomitrella patens GSM313215 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
-------------------ATTTCCGGCATCTTGCTGTGC 	2
------------------------CGGCATCTTGCTGTGCACTAC 	4
--------------------------GCATCTTGCTGTGCACTACTT 	1
---------------------------CATCTTGCTGTGCACTACTTA 	5
----------------------------ATCTTGCTGTGCACTACTTAG 	85
----------------------------ATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTAGT 	19
-----------------------------TCTTGCTGTGCACTACTTAGT 	431
-----------------------------TCTTGCTGTGCACTACTTAG 	37
-----------------------------TCTTGCTGTGCACTACTTAGTA 	1
------------------------------CTTGCTGTGCACTACTTAGTA 	2
------------------------------CTTGCTGTGCACTACTTAGTAC 	12
------------------------------CTTGCTGTGCACTACTTAGT 	4
------------------------------CTTGCTGTGCACTACTTAG 	1
-------------------------------TTGCTGTGCACTACTTAGT 	21
-------------------------------TTGCTGTGCACTACTTAGTA 	182
-------------------------------TTGCTGTGCACTACTTAGTACG 	222
-------------------------------TTGCTGTGCACTACTTAGTAC 	2627
--------------------------------TGCTGTGCACTACTTAGTACG 	393
--------------------------------TGCTGTGCACTACTTAGTA 	6
--------------------------------TGCTGTGCACTACTTAGTACGC 	2
--------------------------------TGCTGTGCACTACTTAGTAC 	90
---------------------------------GCTGTGCACTACTTAGTAC 	9
---------------------------------GCTGTGCACTACTTAGTACG 	4
----------------------------------CTGTGCACTACTTAGTACGCG 	1
-----------------------------------TGTGCACTACTTAGTACGCGC 	1
-------------------------------------TGCACTACTTAGTACGCGCGT 	1
-----------------------------------------------------------------------------------------------------------------------AACTGGCGTGCTGAGTAGTGC 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	4
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	1
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAAT 	1
---------------------------------------------------------------------------------------------------------------------------------CTGAGTAGTGCACAGCAATA 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATG 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	3
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	6
---------------------------------------------------------------------------------------------------------------------------------------------CAGCAATATGCTGGGCATGGA 	3


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Physcomitrella patens GSM313215 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	2
----------------------------GTATTGCTGTGCACTACTTAG 	7
-----------------------------TATTGCTGTGCACTACTTAGT 	3
------------------------------ATTGCTGTGCACTACTTAGTAC 	1
-------------------------------TTGCTGTGCACTACTTAGTACAC 	3
-------------------------------TTGCTGTGCACTACTTAGT 	21
-------------------------------TTGCTGTGCACTACTTAGTA 	182
-------------------------------TTGCTGTGCACTACTTAGTACA 	960
-------------------------------TTGCTGTGCACTACTTAGTAC 	2627
--------------------------------TGCTGTGCACTACTTAGTA 	6
--------------------------------TGCTGTGCACTACTTAGTACA 	138
--------------------------------TGCTGTGCACTACTTAGTAC 	90
---------------------------------GCTGTGCACTACTTAGTAC 	9
---------------------------------GCTGTGCACTACTTAGTACA 	6
----------------------------------CTGTGCACTACTTAGTACA 	1
-----------------------------------------CTACTTAGTACACGCGTATC 	1
-----------------------------------------CTACTTAGTACACGCGTATCGGTTTG 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	14
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	46
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGA 	1
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATAT 	1
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	125
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	162
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	3
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	5
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	2


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Physcomitrella patens GSM115096 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
------------------------CGGCATCTTGCTGTGCACTAC 	1
---------------------------CATCTTGCTGTGCACTACTTA 	6
----------------------------ATCTTGCTGTGCACTACTTAG 	37
----------------------------ATCTTGCTGTGCACTACTTAGTACG 	1
----------------------------ATCTTGCTGTGCACTACTTAGT 	21
-----------------------------TCTTGCTGTGCACTACTTAGTA 	1
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	1
-----------------------------TCTTGCTGTGCACTACTTAGT 	142
-----------------------------TCTTGCTGTGCACTACTTAG 	21
-----------------------------TCTTGCTGTGCACTACTTA 	1
-----------------------------TCTTGCTGTGCACTACTTAGTACG 	1
------------------------------CTTGCTGTGCACTACTTAGT 	1
-------------------------------TTGCTGTGCACTACTTAGTACG 	153
-------------------------------TTGCTGTGCACTACTTAGT 	21
-------------------------------TTGCTGTGCACTACTTAGTACGC 	1
-------------------------------TTGCTGTGCACTACTTAGTAC 	1926
-------------------------------TTGCTGTGCACTACTTAGTA 	147
--------------------------------TGCTGTGCACTACTTAGTACG 	469
--------------------------------TGCTGTGCACTACTTAGTAC 	196
--------------------------------TGCTGTGCACTACTTAGTACGC 	3
--------------------------------TGCTGTGCACTACTTAGTA 	5
---------------------------------GCTGTGCACTACTTAGTAC 	2
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGC 	1
------------------------------------------------------------------------------------------------------------------------ACTGGCGTGCTGAGTAGTGC 	1
------------------------------------------------------------------------------------------------------------------------------GTGCTGAGTAGTGCACAGCAATA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	35
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	9
---------------------------------------------------------------------------------------------------------------------------------CTGAGTAGTGCACAGCAATAT 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATG 	5
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	18
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGCT 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	61
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	5
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATAT 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGC 	1
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGCT 	2
-------------------------------------------------------------------------------------------------------------------------------------GTAGTGCACAGCAATATGC 	5
--------------------------------------------------------------------------------------------------------------------------------------TAGTGCACAGCAATATGCTGG 	1


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Physcomitrella patens GSM115096 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------------GTATTGCTGTGCACTACTTAGTACA 	1
----------------------------GTATTGCTGTGCACTACTTAG 	1
-----------------------------TATTGCTGTGCACTACTTAGTA 	1
------------------------------ATTGCTGTGCACTACTTAGTACA 	2
-------------------------------TTGCTGTGCACTACTTAGTACA 	762
-------------------------------TTGCTGTGCACTACTTAGT 	21
-------------------------------TTGCTGTGCACTACTTAGTAC 	1926
-------------------------------TTGCTGTGCACTACTTAGTA 	147
--------------------------------TGCTGTGCACTACTTAGTAC 	196
--------------------------------TGCTGTGCACTACTTAGTACA 	185
--------------------------------TGCTGTGCACTACTTAGTA 	5
---------------------------------GCTGTGCACTACTTAGTAC 	2
----------------------------------CTGTGCACTACTTAGTACA 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	8
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	2
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	1
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	198
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	33
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	5
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	2
----------------------------------------------------------------------------------------------------------------------------------AGGCAGTGCACAGCGATATGCT 	1


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Physcomitrella patens GSM313216 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
---------TGCTTTGTTCATTTCCGGCATC 	1
------------------------CGGCATCTTGCTGTGCACTAC 	2
---------------------------CATCTTGCTGTGCACTACTTA 	1
----------------------------ATCTTGCTGTGCACTACTTA 	5
----------------------------ATCTTGCTGTGCACTACTTAG 	47
----------------------------ATCTTGCTGTGCACTACTTAGT 	3
-----------------------------TCTTGCTGTGCACTACTTAGT 	46
-----------------------------TCTTGCTGTGCACTACTTA 	1
-----------------------------TCTTGCTGTGCACTACTTAG 	29
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	1
-----------------------------TCTTGCTGTGCACTACTTAGTA 	1
------------------------------CTTGCTGTGCACTACTTAGTA 	3
------------------------------CTTGCTGTGCACTACTTAGTACG 	1
------------------------------CTTGCTGTGCACTACTTAGT 	3
------------------------------CTTGCTGTGCACTACTTAGTAC 	2
-------------------------------TTGCTGTGCACTACTTAGTA 	175
-------------------------------TTGCTGTGCACTACTTAGTACGC 	4
-------------------------------TTGCTGTGCACTACTTAGTAC 	2031
-------------------------------TTGCTGTGCACTACTTAGTACG 	390
-------------------------------TTGCTGTGCACTACTTAGT 	12
--------------------------------TGCTGTGCACTACTTAGTA 	6
--------------------------------TGCTGTGCACTACTTAGTACGCG 	8
--------------------------------TGCTGTGCACTACTTAGTACG 	662
--------------------------------TGCTGTGCACTACTTAGTACGC 	11
--------------------------------TGCTGTGCACTACTTAGTAC 	181
---------------------------------GCTGTGCACTACTTAGTAC 	10
---------------------------------GCTGTGCACTACTTAGTACG 	11
----------------------------------------ACTACTTAGTACGCGCGTAGTTGC 	2
-------------------------------------------------TACGCGCGTAGTTGCAGGCATT 	1
--------------------------------------------------ACGCGCGTAGTTGCAGGCATT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGC 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGCTGA 	1
------------------------------------------------------------------------------------------------------------------------------GTGCTGAGTAGTGCACAGCAATA 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	3
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCA 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	13
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAAT 	2
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	3
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	31
------------------------------------------------------------------------------------------------------------------------------------AGTAGTGCACAGCAATATGC 	1
---------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCAATATGCTGGG 	2


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Physcomitrella patens GSM313216 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	2
------------------------CGGCGTATTGCTGTGCACTAC 	1
----------------------------GTATTGCTGTGCACTACTTAG 	1
-----------------------------TATTGCTGTGCACTACTTAG 	1
------------------------------ATTGCTGTGCACTACTTAGTAC 	14
------------------------------ATTGCTGTGCACTACTTAGTA 	1
-------------------------------TTGCTGTGCACTACTTAGTA 	175
-------------------------------TTGCTGTGCACTACTTAGTAC 	2031
-------------------------------TTGCTGTGCACTACTTAGTACA 	1566
-------------------------------TTGCTGTGCACTACTTAGT 	12
-------------------------------TTGCTGTGCACTACTTAGTACAC 	13
--------------------------------TGCTGTGCACTACTTAGTA 	6
--------------------------------TGCTGTGCACTACTTAGTACA 	162
--------------------------------TGCTGTGCACTACTTAGTAC 	181
---------------------------------GCTGTGCACTACTTAGTAC 	10
---------------------------------GCTGTGCACTACTTAGTACA 	9
----------------------------------CTGTGCACTACTTAGTACA 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	36
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGA 	3
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	9
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATAT 	1
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	81
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	427
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	17
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	1
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	14
---------------------------------------------------------------------------------------------------------------------------------TAGGCAGTGCACAGCGATA 	1


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Physcomitrella patens GSM313214 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
-------------------ATTTCCGGCATCTTGCTGTGC 	2
--------------------TTTCCGGCATCTTGCTGTGC 	1
------------------------CGGCATCTTGCTGTGCACTACTTAGT 	1
------------------------CGGCATCTTGCTGTGCACTAC 	1
---------------------------CATCTTGCTGTGCACTACTTA 	4
----------------------------ATCTTGCTGTGCACTACTTA 	3
----------------------------ATCTTGCTGTGCACTACTTAG 	129
----------------------------ATCTTGCTGTGCACTACTTAGT 	44
-----------------------------TCTTGCTGTGCACTACTTAG 	177
-----------------------------TCTTGCTGTGCACTACTTAGTAC 	1
-----------------------------TCTTGCTGTGCACTACTTAGT 	668
-----------------------------TCTTGCTGTGCACTACTTAGTACG 	1
------------------------------CTTGCTGTGCACTACTTAGTA 	3
------------------------------CTTGCTGTGCACTACTTAGTACG 	2
------------------------------CTTGCTGTGCACTACTTAGTAC 	3
------------------------------CTTGCTGTGCACTACTTAGT 	7
------------------------------CTTGCTGTGCACTACTTAG 	1
-------------------------------TTGCTGTGCACTACTTAGTAC 	3366
-------------------------------TTGCTGTGCACTACTTAGT 	27
-------------------------------TTGCTGTGCACTACTTAGTA 	378
-------------------------------TTGCTGTGCACTACTTAGTACG 	283
--------------------------------TGCTGTGCACTACTTAGTA 	12
--------------------------------TGCTGTGCACTACTTAGTAC 	264
--------------------------------TGCTGTGCACTACTTAGTACG 	456
---------------------------------GCTGTGCACTACTTAGTAC 	14
---------------------------------GCTGTGCACTACTTAGTACG 	7
--------------------------------------------------ACGCGCGTAGTTGCAGGCATT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGC 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	6
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	3
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	2
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAAT 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATG 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATAT 	2
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	6
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	11


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Physcomitrella patens GSM313214 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	4
----------------------------GTATTGCTGTGCACTACTTAG 	25
-----------------------------TATTGCTGTGCACTACTTAGT 	2
-----------------------------TATTGCTGTGCACTACTTAG 	4
------------------------------ATTGCTGTGCACTACTTAGTAC 	1
-------------------------------TTGCTGTGCACTACTTAGTAC 	3366
-------------------------------TTGCTGTGCACTACTTAGTACAC 	3
-------------------------------TTGCTGTGCACTACTTAGT 	27
-------------------------------TTGCTGTGCACTACTTAGTA 	378
-------------------------------TTGCTGTGCACTACTTAGTACA 	855
--------------------------------TGCTGTGCACTACTTAGTA 	12
--------------------------------TGCTGTGCACTACTTAGTACA 	121
--------------------------------TGCTGTGCACTACTTAGTAC 	264
---------------------------------GCTGTGCACTACTTAGTAC 	14
---------------------------------GCTGTGCACTACTTAGTACA 	4
----------------------------------------ACTACTTAGTACACGCGTATCGGT 	1
----------------------------------------ACTACTTAGTACACGCGTA 	1
------------------------------------------------------------------GCACTCCAGATGTAGCAATTGAA 	1
---------------------------------------------------------------------------------------------------------------------CCGCGTGGGTGCTAGGCAGTGC 	2
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	22
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	52
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	158
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	224
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	6
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	10
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	3


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Physcomitrella patens GSM313217 TTGCTGTGCACTACTTAGTAC GCTGAGTAGTGCACAGCAATA up 0 0


Secondary structure

AGATTCATCTGCTTTGTTCATTTCCGGCATCTTGCTGTGCACTACTTAGTACGCGCGTAGTTGCAGGCATTCCGGGTGCAGCAACTGACGCGGAAGACTTTTCCCAGAGTGTGCGCTTCAACTGGCGTGCTGAGTAGTGCACAGCAATATGCTGGGCATGGACAGCTACCACCGCTG
------------------------CGGCATCTTGCTGTGCACTAC 	2
---------------------------CATCTTGCTGTGCACTACTTA 	2
----------------------------ATCTTGCTGTGCACTACTTAG 	42
----------------------------ATCTTGCTGTGCACTACTTA 	3
----------------------------ATCTTGCTGTGCACTACTTAGT 	4
-----------------------------TCTTGCTGTGCACTACTTAGT 	52
-----------------------------TCTTGCTGTGCACTACTTAGTACG 	1
-----------------------------TCTTGCTGTGCACTACTTAG 	17
------------------------------CTTGCTGTGCACTACTTAGTA 	2
------------------------------CTTGCTGTGCACTACTTAGTAC 	1
------------------------------CTTGCTGTGCACTACTTAG 	1
------------------------------CTTGCTGTGCACTACTTAGTACG 	1
-------------------------------TTGCTGTGCACTACTTAGTA 	194
-------------------------------TTGCTGTGCACTACTTAGTACGC 	8
-------------------------------TTGCTGTGCACTACTTAGTACG 	353
-------------------------------TTGCTGTGCACTACTTAGTAC 	1989
-------------------------------TTGCTGTGCACTACTTAGT 	18
--------------------------------TGCTGTGCACTACTTAGTA 	9
--------------------------------TGCTGTGCACTACTTAGTACGCG 	1
--------------------------------TGCTGTGCACTACTTAGTACGC 	15
--------------------------------TGCTGTGCACTACTTAGTACG 	582
--------------------------------TGCTGTGCACTACTTAGTACGCGC 	1
--------------------------------TGCTGTGCACTACTTAGTAC 	171
---------------------------------GCTGTGCACTACTTAGTAC 	7
---------------------------------GCTGTGCACTACTTAGTACG 	10
----------------------------------CTGTGCACTACTTAGTACG 	1
----------------------------------CTGTGCACTACTTAGTACGCG 	1
----------------------------------------ACTACTTAGTACGCGCGTAGTTGC 	3
--------------------------------------------------ACGCGCGTAGTTGCAGGCATT 	1
-------------------------------------------------------------------------------------------------------------TGTGCGCTTCAACTGGCGTGC 	1
-----------------------------------------------------------------------------------------------------------------------------CGTGCTGAGTAGTGCACAGCAAT 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAAT 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTGAGTAGTGCACAGCAATA 	11
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAA 	1
--------------------------------------------------------------------------------------------------------------------------------GCTGAGTAGTGCACAGCAATA 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATGCTGG 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATATGCT 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATAT 	1
----------------------------------------------------------------------------------------------------------------------------------TGAGTAGTGCACAGCAATA 	1
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATG 	2
-----------------------------------------------------------------------------------------------------------------------------------GAGTAGTGCACAGCAATATGC 	39
---------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCAATATGCTGGG 	2
---------------------------------------------------------------------------------------------------------------------------------------AGTGCACAGCAATATGCTGG 	1
---------------------------------------------------------------------------------------------------------------------------------------------CAGCAATATGCTGGGCATGGA 	1


Overlaps with: MNEST039540 MNEST051444
Overlaps with miRBase pre-miRNAs: ppt-MIR898b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Physcomitrella patens GSM313217 TTGCTGTGCACTACTTAGTAC GCTAGGCAGTGCACAGCGATA up 1 0


Secondary structure

ACACCAAACTCTCTTGTTTGTTTCCGGCGTATTGCTGTGCACTACTTAGTACACGCGTATCGGTTTGCACTCCAGATGTAGCAATTGAAAACGAAGATATTCCTGGAAAGTTTGCAACCGCGTGGGTGCTAGGCAGTGCACAGCGATATGCTGGGTATGGACAGCTACTTTTGAAC
----------------------TCCGGCGTATTGCTGTGCACT 	3
------------------------CGGCGTATTGCTGTGCACT 	1
----------------------------GTATTGCTGTGCACTACTTAG 	3
-----------------------------TATTGCTGTGCACTACTTAGT 	1
------------------------------ATTGCTGTGCACTACTTAGTACA 	1
------------------------------ATTGCTGTGCACTACTTAGTAC 	6
-------------------------------TTGCTGTGCACTACTTAGTACAC 	17
-------------------------------TTGCTGTGCACTACTTAGTA 	194
-------------------------------TTGCTGTGCACTACTTAGTAC 	1989
-------------------------------TTGCTGTGCACTACTTAGTACA 	1491
-------------------------------TTGCTGTGCACTACTTAGT 	18
--------------------------------TGCTGTGCACTACTTAGTA 	9
--------------------------------TGCTGTGCACTACTTAGTACAC 	1
--------------------------------TGCTGTGCACTACTTAGTACA 	131
--------------------------------TGCTGTGCACTACTTAGTAC 	171
---------------------------------GCTGTGCACTACTTAGTAC 	7
---------------------------------GCTGTGCACTACTTAGTACA 	5
----------------------------------CTGTGCACTACTTAGTACA 	2
-------------------------------------------------------------------------------------------------------------------AACCGCGTGGGTGCTAGGCAGTGC 	2
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGATA 	46
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGA 	1
------------------------------------------------------------------------------------------------------------------------------TGCTAGGCAGTGCACAGCGAT 	9
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATAT 	1
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGATA 	405
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGAT 	61
-------------------------------------------------------------------------------------------------------------------------------GCTAGGCAGTGCACAGCGA 	10
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGAT 	2
--------------------------------------------------------------------------------------------------------------------------------CTAGGCAGTGCACAGCGATA 	11
---------------------------------------------------------------------------------------------------------------------------------TAGGCAGTGCACAGCGATA 	1
----------------------------------------------------------------------------------------------------------------------------------------------------TGCTGGGTATGGACAGCTACTTTTGA 	1


Overlaps with: MNEST045986
Overlaps with miRBase pre-miRNAs: ppt-MIR898a
HuntMi prediction: true miRNA