miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTGGCATTCTGTCCACCTCC

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506620-12051 TTGGCATTCTGTCCACCTCC AGGTGGGCATACTGCCAATG up 3 0


Secondary structure

CAGTAGTAATAGTCATGTGGGTTTGCCAAAGGGGCGCTTACCGAGAGCTCTTTGGCATTCTGTCCACCTCCTTGCGAGTCTCGCGGGAGATCTCATGATCTGTTGTTGAGCTTGCAGATAGCTTGGAGGTGGGCATACTGCCAATGGAGCTGTGTAGGCTTCCCTTTGTAAAACCCATATGGCGAAGATCAAAC
-------------------------------------------------CTTTGGCATTCTGTCCACCTCC 	1
---------------------------------------------------TTGGCATTCTGTCCACCTCCTTGC 	1
---------------------------------------------------TTGGCATTCTGTCCACCTCCT 	2
---------------------------------------------------TTGGCATTCTGTCCACCTCC 	705
---------------------------------------------------TTGGCATTCTGTCCACCTC 	16
---------------------------------------------------------------------------------CGCGGGAGATCTCATGATCTGTTG 	1
------------------------------------------------------------------------------------------------------------------------------AGGTGGGCATACTGCCAATGGA 	22
---------------------------------------------------------------------------------------------------------------------------------------------------AGCTGTGTAGGCTTCCCTTTG 	1

Overlaps with: MNEST041776
Overlaps with miRBase pre-miRNAs: bdi-MIR394
HuntMi prediction: true miRNA