miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTTAGAATTCCTACGCTTTACC

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TTTAGAATTCCTACGCTTTACC CAAAGCGTTTGAATTGTAAAAC up 4 0


Secondary structure

CCGCTACAGCAAGGGTCCTGTGGTGTTTGGTTTTAGAATTCCTACGCTTTACCGTACAATTTTATCGGCAAAGCGTTTGAATTGTAAAACCGAACCCCAGTACGAACATCATGCAAAT
------------------------------TTTTAGAATTCCTACGCTTTAC 	1
-------------------------------TTTAGAATTCCTACGCTTTACC 	197
-------------------------------TTTAGAATTCCTACGCTTTA 	120
-------------------------------TTTAGAATTCCTACGCTTTACCG 	20
-------------------------------TTTAGAATTCCTACGCTTTAC 	50
-------------------------------TTTAGAATTCCTACGCTTT 	4
--------------------------------TTAGAATTCCTACGCTTTACC 	1
--------------------------------TTAGAATTCCTACGCTTTAC 	1
-------------------------------------------------------------------GCAAAGCGTTTGAATTGTAAAAC 	1
-------------------------------------------------------------------GCAAAGCGTTTGAATTGTAAA 	1
-------------------------------------------------------------------GCAAAGCGTTTGAATTGTA 	1
--------------------------------------------------------------------CAAAGCGTTTGAATTGTAAAAC 	8
--------------------------------------------------------------------CAAAGCGTTTGAATTGTAA 	7
--------------------------------------------------------------------CAAAGCGTTTGAATTGTAAAA 	1
--------------------------------------------------------------------CAAAGCGTTTGAATTGTAAA 	1

Overlaps with: MNEST035088
Overlaps with miRBase pre-miRNAs: api-mir-927
HuntMi prediction: true miRNA