miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTTCTTCTTAGACATGGCAACG

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494809_Normal_1 TTTCTTCTTAGACATGGCAACG CTGCCATGTCTAAGAAGAAAAC down 3 0


Secondary structure

GGAGTCTCTTGACTTGGATTTCTTTGGAAGAAACTGCTGAAGCTGCCATGTCTAAGAAGAAAACTTTGGAGAAAAATTTTCTTCTTAGACATGGCAACGTCAACAGTTTCTAAGCTCTTGATTCCGTCTACCCTGTCT
-----------------------------------------------------------------------------TTTCTTCTTAGACATGGCAACG 	6
-----------------------------------------------------------------------------TTTCTTCTTAGACATGGCAACGT 	1
------------------------------------------------------------------------------TTCTTCTTAGACATGGCAACGT 	5
-------------------------------------------------------------------------------TCTTCTTAGACATGGCAACGT 	3

Overlaps with: MNEST029790 MNEST029791
Overlaps with miRBase pre-miRNAs: hsa-mir-4659b hsa-mir-4659a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM531978 TTTCTTCTTAGACATGGCAACG CTGCCATGTCTAAGAAGAAAAC down 3 0


Secondary structure

GGAGTCTCTTGACTTGGATTTCTTTGGAAGAAACTGCTGAAGCTGCCATGTCTAAGAAGAAAACTTTGGAGAAAAATTTTCTTCTTAGACATGGCAACGTCAACAGTTTCTAAGCTCTTGATTCCGTCTACCCTGTCT
-----------------------------------------------------------------------------TTTCTTCTTAGACATGGCAACG 	5
------------------------------------------------------------------------------TTCTTCTTAGACATGGCAA 	1
------------------------------------------------------------------------------TTCTTCTTAGACATGGCAAC 	1

Overlaps with: MNEST029790 MNEST029791
Overlaps with miRBase pre-miRNAs: hsa-mir-4659b hsa-mir-4659a
HuntMi prediction: true miRNA