miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TTTGGATTGAAGGGAGCTCTG

selected species: Oryza sativa

18 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Oryza sativa	GSM520638-18676	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
-------GTGTTGTGGACGTTGAGCTCC 	1
-------------------TTGAGCTCCTTTCGGTCCAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAAAA 	4
-------------------TTGAGCTCCTTTCGGTCCAAAAAG 	1
-------------------TTGAGCTCCTTTCGGTCCAAA 	43
-------------------TTGAGCTCCTTTCGGTCCAAAA 	2
--------------------TGAGCTCCTTTCGGTCCAAAAAGGG 	1
--------------------TGAGCTCCTTTCGGTCCAAAAAGG 	1
--------------------TGAGCTCCTTTCGGTCCAAAA 	183
--------------------TGAGCTCCTTTCGGTCCAAA 	14
--------------------TGAGCTCCTTTCGGTCCAAAAA 	121
---------------------GAGCTCCTTTCGGTCCAAA 	12
---------------------GAGCTCCTTTCGGTCCAAAAA 	465
---------------------GAGCTCCTTTCGGTCCAAAA 	52
----------------------AGCTCCTTTCGGTCCAAAAA 	28
----------------------AGCTCCTTTCGGTCCAAAA 	3
----------------------AGCTCCTTTCGGTCCAAAAAG 	15
-----------------------GCTCCTTTCGGTCCAAAAA 	21
-----------------------GCTCCTTTCGGTCCAAAAAG 	3
-------------------------TCCTTTCGGTCCAAAAAGGGG 	2
----------------------------------------AAGGGGTGTTGCTGTGGGTCG 	1
----------------------------------------AAGGGGTGTTGCTGTGGGTCGATTG 	5
-----------------------------------------AGGGGTGTTGCTGTGGGTCGATTGA 	1
-----------------------------------------AGGGGTGTTGCTGTGGGTCGATTG 	1
------------------------------------------GGGGTGTTGCTGTGGGTCG 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTGA 	7
------------------------------------------GGGGTGTTGCTGTGGGTCGATT 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	19
------------------------------------------------------TGGGTCGATTGAGCTGCTGGGTC 	1
------------------------------------------------------TGGGTCGATTGAGCTGCTGG 	1
----------------------------------------------------------------GAGCTGCTGGGTCATGGATCCC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCCC 	3
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	34
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCC 	14
-----------------------------------------------------------------------TGGGTCATGGATCCCGTTAGC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCT 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGCA 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	32
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	6
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTG 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	78
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGCCCCAGGAGCTGC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCTT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	17
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	4
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCC 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCCTCTTTGGATTGAAGGG 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTTGGATTGAAGGGAGC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGCT 	3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGC 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCT 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	6
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	44
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	76
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	121
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	924
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	85964
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	366
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	2420
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	6
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	19
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	975
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	117
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	1894
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	132
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	38
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	15
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATCT 	1

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Oryza sativa	GSM520638-18676	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATG 	3
----------------------GAGCTCCTTTCGTTCCAATGA 	4
---------------------------------------------------------------------------------------ACTATTCTATCTCATAGGAAAAGAGA 	1
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGA 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGCT 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGC 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCT 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	6
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	44
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	76
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	121
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	924
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	85964
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	366
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	2420
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	6
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	19
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	975
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	117
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	1894
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	132
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	38
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	15
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATCT 	1

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Oryza sativa	GSM686040-31373	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATGA 	1
------------------------------------------------------------------AGCTGCTTGTTCATGGTTCCC 	1
------------------------------------------------------------------AGCTGCTTGTTCATGGTTCC 	1
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAATCAA 	1
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAAT 	2
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAA 	4
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGA 	58
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCG 	2
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	10
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	109
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	1293
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	254
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	458
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	171
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	19
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	58
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	4
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	18
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	6

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Oryza sativa	GSM686040-31373	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
-------------------TTGAGCTCCTTTCGGTCCAAAA 	6
-------------------TTGAGCTCCTTTCGGTCCAAA 	56
-------------------TTGAGCTCCTTTCGGTCCAA 	1
--------------------TGAGCTCCTTTCGGTCCAAAAA 	5
--------------------TGAGCTCCTTTCGGTCCAAAA 	47
--------------------TGAGCTCCTTTCGGTCCAAA 	6
---------------------GAGCTCCTTTCGGTCCAAAAA 	1
---------------------GAGCTCCTTTCGGTCCAAA 	2
---------------------------------------------------------------TGAGCTGCTGGGTCATGGATCC 	2
---------------------------------------------------------------TGAGCTGCTGGGTCATGGATC 	1
----------------------------------------------------------------GAGCTGCTGGGTCATGGATCCC 	6
----------------------------------------------------------------GAGCTGCTGGGTCATGGATCC 	4
----------------------------------------------------------------GAGCTGCTGGGTCATGGATC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	10
-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGATAGGAAAATGATGGAGTAC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	7
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCAT 	5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	40
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	335
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTG 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGCCCCAGGAGCTGC 	3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCAGGAGCTGCATCAACCCTA 	2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGAGCTGCATCAACCCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCTGCATCAACCCTACA 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTTGGATTGAAGGGAGC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	10
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	109
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	1293
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	254
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	458
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	171
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	19
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	58
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	4
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	18
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	6

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Oryza sativa	GSM520640-18679	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
------------------GTTGAGCTCCTTTCGGTCCAAAAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAAAA 	6
-------------------TTGAGCTCCTTTCGGTCCAAAAAGG 	1
-------------------TTGAGCTCCTTTCGGTCCAAAAAG 	2
-------------------TTGAGCTCCTTTCGGTCCAAA 	31
--------------------TGAGCTCCTTTCGGTCCAAAAAGG 	1
--------------------TGAGCTCCTTTCGGTCCAAAA 	207
--------------------TGAGCTCCTTTCGGTCCAAA 	11
--------------------TGAGCTCCTTTCGGTCCAA 	1
--------------------TGAGCTCCTTTCGGTCCAAAAA 	127
---------------------GAGCTCCTTTCGGTCCAAAAAG 	2
---------------------GAGCTCCTTTCGGTCCAAA 	13
---------------------GAGCTCCTTTCGGTCCAAAAAGGG 	1
---------------------GAGCTCCTTTCGGTCCAAAAA 	601
---------------------GAGCTCCTTTCGGTCCAAAA 	83
----------------------AGCTCCTTTCGGTCCAAAAA 	22
----------------------AGCTCCTTTCGGTCCAAAA 	7
----------------------AGCTCCTTTCGGTCCAAAAAG 	11
-----------------------GCTCCTTTCGGTCCAAAAA 	19
-------------------------TCCTTTCGGTCCAAAAAGGGG 	3
----------------------------TTTCGGTCCAAAAAGGGGTGTTGCTG 	1
-----------------------------------------AGGGGTGTTGCTGTGGGTCGATTG 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGA 	2
------------------------------------------GGGGTGTTGCTGTGGGTCGAT 	2
------------------------------------------GGGGTGTTGCTGTGGGTCGATTGA 	7
------------------------------------------GGGGTGTTGCTGTGGGTCGATT 	2
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	15
-------------------------------------------GGGTGTTGCTGTGGGTCGAT 	1
--------------------------------------------------------------TTGAGCTGCTGGGTCATGGATC 	1
---------------------------------------------------------------TGAGCTGCTGGGTCATGGATC 	1
----------------------------------------------------------------GAGCTGCTGGGTCATGGATC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCC 	13
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCCC 	3
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	23
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCT 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGCA 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	55
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	8
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	97
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCCCAGGAGCTGCAT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCTT 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	13
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	7
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTTGGATTGAAGGGAGC 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	50
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	31
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	82
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	6
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	926
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	81989
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	213
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	1734
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	22
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	795
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	38
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	1570
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	78
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	49
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	18
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATC 	1

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Oryza sativa	GSM520640-18679	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATGA 	5
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGA 	1
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	50
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	31
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	82
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	6
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	926
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	81989
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	213
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	1734
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	22
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	795
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	38
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	1570
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	78
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	49
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	18
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATC 	1

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Oryza sativa	GSM686039-31370	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
--------------------------------------------AGGTTTATCTGAAGGGTGATAC 	1
------------------------------------------------------------------AGCTGCTTGTTCATGGTTCCC 	1
----------------------------------------------------------------------------------------------------ATAGGAAAAGAGATAGGCT 	1
------------------------------------------------------------------------------------------------------AGGAAAAGAGATAGGCTTGTG 	2
------------------------------------------------------------------------------------------------------AGGAAAAGAGATAGGCTTG 	2
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAATC 	2
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAAT 	2
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAA 	7
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGA 	190
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCG 	9
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCC 	3
-----------------------------------------------------------------------------------------------------------------------------TTGCATGACCAAGGAGCCGA 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	63
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	655
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	95
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	173
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	77
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	7
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	6
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	11
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	2

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Oryza sativa	GSM686039-31370	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
-------------------TTGAGCTCCTTTCGGTCCAAAA 	4
-------------------TTGAGCTCCTTTCGGTCCAAA 	37
--------------------TGAGCTCCTTTCGGTCCAAAAA 	2
--------------------TGAGCTCCTTTCGGTCCAAAA 	31
--------------------TGAGCTCCTTTCGGTCCAAA 	3
---------------------GAGCTCCTTTCGGTCCAAAAA 	4
---------------------GAGCTCCTTTCGGTCCAAAA 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGAT 	1
---------------------------------------------------------------TGAGCTGCTGGGTCATGGATCC 	1
---------------------------------------------------------------TGAGCTGCTGGGTCATGGATC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCCC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCC 	4
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	48
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	37
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	15
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	67
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGCCCCAGGAGCTGCA 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGCCCCAGGAGCTGC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCAGGAGCTGCATCAACCCTA 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAGGAGCTGCATCAACCCTAC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCTGCATCAACCCTAC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTC 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	63
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	655
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	95
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	173
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	77
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	7
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	6
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	11
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	2

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Oryza sativa	GSM520634-18667	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------ATCAACTCCTTGCTGACCACTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	314
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	19
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	2

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Oryza sativa	GSM520634-18667	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
-------------------TTGAGCTCCTTTCGGTCCAAAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAA 	1
----------------------AGCTCCTTTCGGTCCAAAAAG 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCTT 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	314
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	19
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	2

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Oryza sativa	GSM520636-18672	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
---------------------GAGCTCCTTTCGGTCCAAAAA 	2
----------------------AGCTCCTTTCGGTCCAAAAAG 	2
--------------------------------------AAAAGGGGTGTTGCTGTGGGTCGAT 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	2
----------------------------------------------TGTTGCTGTGGGTCGATTG 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTACTCGTTGTTGGGATA 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCTT 	5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	6
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	40
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	3046
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	10
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	37
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	23
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	9
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	1

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Oryza sativa	GSM520636-18672	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	40
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	3046
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	10
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	37
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	23
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	9
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	1

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Oryza sativa	GSM520635-18669	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATGAA 	2
----------------------GAGCTCCTTTCGTTCCAATG 	1
----------------------GAGCTCCTTTCGTTCCAATGAAA 	2
------------------------------------------------------------------AGCTGCTTGTTCATGGTTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	20
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	1312
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	22
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	10
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	4
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	11
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCATC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	1

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Oryza sativa	GSM520635-18669	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
----------------ACGTTGAGCTCCTTTCGGTCCAAA 	1
------------------GTTGAGCTCCTTTCGGTCCAAAA 	1
------------------GTTGAGCTCCTTTCGGTCCAA 	2
------------------GTTGAGCTCCTTTCGGTCCAAAAA 	4
-------------------TTGAGCTCCTTTCGGTCCAAAAAGG 	10
-------------------TTGAGCTCCTTTCGGTCCAAAAAG 	27
--------------------TGAGCTCCTTTCGGTCCAAAAAG 	1
--------------------TGAGCTCCTTTCGGTCCAAAAAGG 	3
--------------------TGAGCTCCTTTCGGTCCAAAAA 	1
---------------------GAGCTCCTTTCGGTCCAAAAA 	13
---------------------GAGCTCCTTTCGGTCCAAAA 	1
----------------------AGCTCCTTTCGGTCCAAAAA 	1
----------------------AGCTCCTTTCGGTCCAAAAAG 	14
----------------------------------------AAGGGGTGTTGCTGTGGGTCGATTG 	5
-----------------------------------------AGGGGTGTTGCTGTGGGTCGATTG 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	7
-------------------------------------------------------GGGTCGATTGAGCTGCTGGGTCA 	1
-------------------------------------------------------GGGTCGATTGAGCTGCTGGGTCAT 	7
----------------------------------------------------------------GAGCTGCTGGGTCATGGATC 	3
----------------------------------------------------------------GAGCTGCTGGGTCATGGATCCC 	26
----------------------------------------------------------------GAGCTGCTGGGTCATGGATCCCGT 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGGAGCTGCATCAACCCTA 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGAGCTGCATCAACCCTA 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGACCCTCTTTGGATTGAAG 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	20
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	1312
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	22
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	10
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	11
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCATC 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	1

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Oryza sativa	GSM520637-18674	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	4
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	24
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	25
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	366
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	26218
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	136
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	626
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	437
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	21
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	505
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	15
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	10

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Oryza sativa	GSM520637-18674	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
-----------TGTGGACGTTGAGCTCCTTT 	1
-------------------TTGAGCTCCTTTCGGTCCAAAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAAAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAAAAG 	1
-------------------TTGAGCTCCTTTCGGTCCAAA 	10
--------------------TGAGCTCCTTTCGGTCCAAAA 	37
--------------------TGAGCTCCTTTCGGTCCAAA 	1
--------------------TGAGCTCCTTTCGGTCCAAAAA 	12
---------------------GAGCTCCTTTCGGTCCAAA 	1
---------------------GAGCTCCTTTCGGTCCAAAAA 	27
---------------------GAGCTCCTTTCGGTCCAAAA 	6
----------------------AGCTCCTTTCGGTCCAAAAA 	1
----------------------AGCTCCTTTCGGTCCAAAAAG 	3
-----------------------GCTCCTTTCGGTCCAAAAA 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTGA 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	3
---------------------------------------------GTGTTGCTGTGGGTCGATTG 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCC 	1
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	2
----------------------------------------------------------------------------------------------------------------------------------------------TTATACTAATAGTATGTGTGTAGAT 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGGAAAATGATGGAGTACTCGTT 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	9
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCAT 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	14
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACCCTACATGGACCCTCTT 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	24
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	25
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	366
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	26218
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	136
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	626
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	437
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	21
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	505
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	15
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	10

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Oryza sativa	GSM520639-18678	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGTTCCAATGA	down	2	0

Secondary structure

GTTGCGTTTTGGTTATGAAGTGGAGCTCCTTTCGTTCCAATGAAAGGTTTATCTGAAGGGTGATACAGCTGCTTGTTCATGGTTCCCACTATTCTATCTCATAGGAAAAGAGATAGGCTTGTGGTTTGCATGACCAAGGAGCCGAATCAACTCCTTGCTGACCACTCTTTGGATTGAAGGGAGCTCTGCATCTTGATCCCATATAGT
----------------------GAGCTCCTTTCGTTCCAATG 	1
----------------------GAGCTCCTTTCGTTCCAATGA 	7
-------------------------------------------AAGGTTTATCTGAAGGGTGATAC 	3
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCG 	3
----------------------------------------------------------------------------------------------------------------------------TTTGCATGACCAAGGAGCCGAA 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGCTCTG 	5
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	93
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	15
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	122
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	232
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	14
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	481
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	2076
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	4221
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	177822
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	52
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCAT 	2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	143
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	1880
------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	3372
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	249
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCATCT 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	71
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	37
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	4
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATCT 	7

Overlaps with: MNEST041918 MNEST048820
Overlaps with miRBase pre-miRNAs: osa-MIR159b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Oryza sativa	GSM520639-18678	TTTGGATTGAAGGGAGCTCTG	GAGCTCCTTTCGGTCCAAAAA	down	1	0

Secondary structure

CTGGAAAGTGTTGTGGACGTTGAGCTCCTTTCGGTCCAAAAAGGGGTGTTGCTGTGGGTCGATTGAGCTGCTGGGTCATGGATCCCGTTAGCCTACTCCATGTTCATCATTCAGCTCGAGATCTGAAAGAAACTACTCCAATTTATACTAATAGTATGTGTGTAGATAGGAAAATGATGGAGTACTCGTTGTTGGGATAGGCTTATGGCTTGCATGCCCCAGGAGCTGCATCAACCCTACATGGACCCTCTTTGGATTGAAGGGAGCTCTGCATCTTTTGTCACCCTCGA
------------------GTTGAGCTCCTTTCGGTCCAAAAA 	1
-------------------TTGAGCTCCTTTCGGTCCAAAA 	5
-------------------TTGAGCTCCTTTCGGTCCAAAAA 	8
-------------------TTGAGCTCCTTTCGGTCCAAA 	60
-------------------TTGAGCTCCTTTCGGTCCAAAAAG 	10
--------------------TGAGCTCCTTTCGGTCCAAAA 	243
--------------------TGAGCTCCTTTCGGTCCAA 	3
--------------------TGAGCTCCTTTCGGTCCAAAAA 	145
--------------------TGAGCTCCTTTCGGTCCAAAAAG 	3
--------------------TGAGCTCCTTTCGGTCCAAA 	16
---------------------GAGCTCCTTTCGGTCCAAA 	3
---------------------GAGCTCCTTTCGGTCCAAAAA 	620
---------------------GAGCTCCTTTCGGTCCAAAA 	66
----------------------AGCTCCTTTCGGTCCAAAAA 	16
----------------------AGCTCCTTTCGGTCCAAAAAG 	30
----------------------AGCTCCTTTCGGTCCAAAAAGG 	1
----------------------AGCTCCTTTCGGTCCAAAA 	2
-----------------------GCTCCTTTCGGTCCAAAAA 	7
-----------------------GCTCCTTTCGGTCCAAAAAGG 	1
-----------------------GCTCCTTTCGGTCCAAAAAG 	2
------------------------CTCCTTTCGGTCCAAAAAG 	1
----------------------------------------AAGGGGTGTTGCTGTGGGTCGATTG 	1
-----------------------------------------AGGGGTGTTGCTGTGGGTCGATT 	2
------------------------------------------GGGGTGTTGCTGTGGGTCGATTGA 	5
------------------------------------------GGGGTGTTGCTGTGGGTCGATT 	1
------------------------------------------GGGGTGTTGCTGTGGGTCGATTG 	40
----------------------------------------------TGTTGCTGTGGGTCGATTG 	1
-------------------------------------------------------GGGTCGATTGAGCTGCTGGGT 	3
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCC 	4
-----------------------------------------------------------------AGCTGCTGGGTCATGGATCCC 	2
-----------------------------------------------------------------AGCTGCTGGGTCATGGATC 	6
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTG 	3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCT 	2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCATGCCCCAGGAGCTGC 	14
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCAT 	1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGC 	46
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCATGCCCCAGGAGCTGCA 	6
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTC 	5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCTT 	3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCT 	110
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAACCCTACATGGACCCTCT 	24
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTGGATTGAAGGGAGCTCTG 	5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTCTG 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGGATTGAAGGGAGCTC 	93
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTGC 	15
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCTG 	122
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCT 	3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGGATTGAAGGGAGCTCT 	232
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGCA 	14
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTC 	481
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTGC 	2076
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCT 	4221
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATTGAAGGGAGCTCTG 	177822
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCA 	52
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGCAT 	2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCT 	143
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTGC 	1880
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATTGAAGGGAGCTCTG 	3372
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTG 	249
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCATCT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGC 	71
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTGAAGGGAGCTCTGCA 	37
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGATTGAAGGGAGCTCTGC 	4
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTGAAGGGAGCTCTGCATC 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAGGGAGCTCTGCATCT 	7

Overlaps with: MNEST041916 MNEST041917 MNEST048819
Overlaps with miRBase pre-miRNAs: tae-MIR159b osa-MIR159a
HuntMi prediction: true miRNA