miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TTTGTTTTAGCCTGAGCTATG

selected species: Caenorhabditis elegans



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Caenorhabditis elegans GSM297751-9445 TTTGTTTTAGCCTGAGCTATG TAGCTTCTTGCTAAAACATGCC up 3 1


Secondary structure

GAATTGAATGGTTTGTTTTAGCCTGAGCTATGAGTCATCGGAATATGCATAGCTTCTTGCTAAAACATGCCAATCAATC
-----------TTTGTTTTAGCCTGAGCTATG 	40
-----------TTTGTTTTAGCCTGAGCTAT 	2
-------------------------------------------------TAGCTTCTTGCTAAAACATGCC 	2

Overlaps with: MNEST038380
Overlaps with miRBase pre-miRNAs: cel-mir-355
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Caenorhabditis elegans GSM297752-9446 TTTGTTTTAGCCTGAGCTATG TAGCTTCTTGCTAAAACATGCC up 3 1


Secondary structure

GAATTGAATGGTTTGTTTTAGCCTGAGCTATGAGTCATCGGAATATGCATAGCTTCTTGCTAAAACATGCCAATCAATC
---------GGTTTGTTTTAGCCTGAGCTA 	1
-----------TTTGTTTTAGCCTGAGCTATG 	62
-----------TTTGTTTTAGCCTGAGCTATGA 	2

Overlaps with: MNEST038380
Overlaps with miRBase pre-miRNAs: cel-mir-355
HuntMi prediction: true miRNA