miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TTTTGCGATGTGTTCCTAATAT

selected species: Mus musculus

44 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATA 	10
---------------------TTTTGCGATGTGTTCCTAATAT 	72
---------------------TTTTGCGATGTGTTCCTAAT 	12

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527274-2107	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATA 	10
---------------------TTTTGCGATGTGTTCCTAATAT 	72
---------------------TTTTGCGATGTGTTCCTAAT 	12
--------------------------------------------------------ATTGGGGATGCTTTGCATTCAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM527280	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATA 	13
---------------------TTTTGCGATGTGTTCCTAAT 	8
---------------------TTTTGCGATGTGTTCCTAATAT 	40

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM527280	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATA 	13
---------------------TTTTGCGATGTGTTCCTAAT 	8
---------------------TTTTGCGATGTGTTCCTAATAT 	40

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539838	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	8
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539838	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
CAAAGAGAGATACTGAGCTGT 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	8
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM539850	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	48
---------------------TTTTGCGATGTGTTCCTAATA 	1
---------------------TTTTGCGATGTGTTCCTAAT 	10
---------------------TTTTGCGATGTGTTCCTAA 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539850	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
--AAGAGAGATACTGAGCTGT 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	48
---------------------TTTTGCGATGTGTTCCTAATA 	1
---------------------TTTTGCGATGTGTTCCTAAT 	10
---------------------TTTTGCGATGTGTTCCTAA 	1
------------------------------------------------------ATATTGGGAACATTTTGCAT 	1
-------------------------------------------------------TATTGGGAACATTTTGCAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	2
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	4
--------------------------------------------------------ATTGGGAACATTTTGCATAAATA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539835	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	28
---------------------TTTTGCGATGTGTTCCTAATA 	1
---------------------TTTTGCGATGTGTTCCTAAT 	2

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM539835	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	28
---------------------TTTTGCGATGTGTTCCTAATA 	1
---------------------TTTTGCGATGTGTTCCTAAT 	2

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM527276	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATA 	17
---------------------TTTTGCGATGTGTTCCTAAT 	19
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	73

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM527276	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATA 	17
---------------------TTTTGCGATGTGTTCCTAAT 	19
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	73

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539869	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	6

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539869	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	6
--------------------------------------------------------ATTGGGGATGCTTTGCATTCAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539870	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	21
---------------------TTTTGCGATGTGTTCCTAATA 	9
---------------------TTTTGCGATGTGTTCCTAAT 	2

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539870	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	21
---------------------TTTTGCGATGTGTTCCTAATA 	9
---------------------TTTTGCGATGTGTTCCTAAT 	2
------------------------------------------------------ATATTGGGAACATTTTGCAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAATA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	7
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	2
--------------------------------------------------------ATTGGGAACATTTTGCATA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539849	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	31
---------------------TTTTGCGATGTGTTCCTAATA 	8
---------------------TTTTGCGATGTGTTCCTAAT 	8
---------------------TTTTGCGATGTGTTCCTAA 	4
-------------------------------------------------------TATTGGGAACATTTTGCATA 	1
-------------------------------------------------------TATTGGGAACATTTTGCAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	7
--------------------------------------------------------ATTGGGAACATTTTGCATAA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539849	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	31
---------------------TTTTGCGATGTGTTCCTAATA 	8
---------------------TTTTGCGATGTGTTCCTAAT 	8
---------------------TTTTGCGATGTGTTCCTAA 	4

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539848	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	54
---------------------TTTTGCGATGTGTTCCTAATA 	6
---------------------TTTTGCGATGTGTTCCTAAT 	12
---------------------TTTTGCGATGTGTTCCTAA 	3
-------------------------------------------------------TATTGGGAACATTTTGCAT 	3
--------------------------------------------------------ATTGGGAACATTTTGCATAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	9

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM539848	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
--AACCAAGATGCTGAACTAT 	1
-------------------ATTTTTGCGATGTGTTCCTAAT 	1
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	54
---------------------TTTTGCGATGTGTTCCTAATA 	6
---------------------TTTTGCGATGTGTTCCTAAT 	12
---------------------TTTTGCGATGTGTTCCTAA 	3
--------------------------------------------------------ATTGGGGATGCTTTGCATTCAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539864	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATA 	3
---------------------TTTTGCGATGTGTTCCTAAT 	2
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	13

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Mus musculus	GSM539864	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATA 	3
---------------------TTTTGCGATGTGTTCCTAAT 	2
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	13
-------------------------------------------------------TATTGGGAACATTTTGCATAA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Mus musculus	GSM539872	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	36
---------------------TTTTGCGATGTGTTCCTAATA 	9
---------------------TTTTGCGATGTGTTCCTAAT 	7
---------------------TTTTGCGATGTGTTCCTAA 	2
-------------------------------------------------------TATTGGGAACATTTTGCATAAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	4
---------------------------------------------------------TTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Mus musculus	GSM539872	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
-------------------ATTTTTGCGATGTGTTCCTAAT 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	36
---------------------TTTTGCGATGTGTTCCTAATA 	9
---------------------TTTTGCGATGTGTTCCTAAT 	7
---------------------TTTTGCGATGTGTTCCTAA 	2
--------------------------------------------------------ATTGGGGATGCTTTGCATT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Mus musculus	GSM539861	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	7
---------------------TTTTGCGATGTGTTCCTAA 	2
---------------------TTTTGCGATGTGTTCCTAATA 	2
----------------------TTTGCGATGTGTTCCTAATAT 	1
-------------------------------------------------------TATTGGGAACATTTTGCAT 	2
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATA 	1
---------------------------------------------------------TTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
26	Mus musculus	GSM539861	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	7
---------------------TTTTGCGATGTGTTCCTAA 	2
---------------------TTTTGCGATGTGTTCCTAATA 	2
----------------------TTTGCGATGTGTTCCTAATAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
27	Mus musculus	GSM539853	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	6
---------------------TTTTGCGATGTGTTCCTAATA 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
28	Mus musculus	GSM539853	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	6
---------------------TTTTGCGATGTGTTCCTAATA 	1
-------------------------------------------------------TATTGGGAACATTTTGCAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	4

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
29	Mus musculus	GSM539878	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---ACCAAGATGCTGAACTATT 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	46
---------------------TTTTGCGATGTGTTCCTAATA 	6
---------------------TTTTGCGATGTGTTCCTAA 	4
---------------------TTTTGCGATGTGTTCCTAAT 	8
--------------------------------------------------------ATTGGGGATGCTTTGCATTCAT 	1
--------------------------------------------------------ATTGGGGATGCTTTGCATT 	2

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
30	Mus musculus	GSM539878	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
CAAAGAGAGATACTGAGCTGT 	1
-AAAGAGAGATACTGAGCTGT 	1
--AAGAGAGATACTGAGCTGT 	2
--AAGAGAGATACTGAGCTGTT 	2
---------------------TTTTGCGATGTGTTCCTAATAT 	46
---------------------TTTTGCGATGTGTTCCTAATA 	6
---------------------TTTTGCGATGTGTTCCTAA 	4
---------------------TTTTGCGATGTGTTCCTAAT 	8
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAATA 	2
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	5
--------------------------------------------------------ATTGGGAACATTTTGCATA 	2

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
31	Mus musculus	GSM539873	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	11
---------------------TTTTGCGATGTGTTCCTAATA 	4
---------------------TTTTGCGATGTGTTCCTAAT 	3

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
32	Mus musculus	GSM539873	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	11
---------------------TTTTGCGATGTGTTCCTAATA 	4
---------------------TTTTGCGATGTGTTCCTAAT 	3
-------------------------------------------------------TATTGGGAACATTTTGCAT 	2
-------------------------------------------------------TATTGGGAACATTTTGCATA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
33	Mus musculus	GSM539875	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	58
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATA 	5
---------------------TTTTGCGATGTGTTCCTAAT 	12
---------------------TTTTGCGATGTGTTCCTAA 	4

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
34	Mus musculus	GSM539875	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	58
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATA 	5
---------------------TTTTGCGATGTGTTCCTAAT 	12
---------------------TTTTGCGATGTGTTCCTAA 	4
-------------------------------------------------------TATTGGGAACATTTTGCAT 	1
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	2
---------------------------------------------------------TTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
35	Mus musculus	GSM539857	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	16
---------------------TTTTGCGATGTGTTCCTAAT 	5
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATA 	7

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
36	Mus musculus	GSM539857	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	16
---------------------TTTTGCGATGTGTTCCTAAT 	5
---------------------TTTTGCGATGTGTTCCTAA 	1
---------------------TTTTGCGATGTGTTCCTAATA 	7
---------------------------------------------------------TTGGGAACATTTTGCATAA 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
37	Mus musculus	GSM539867	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	12
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	4

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
38	Mus musculus	GSM539867	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	12
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	4
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
39	Mus musculus	GSM539876	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATAT 	34
---------------------TTTTGCGATGTGTTCCTAATA 	8
---------------------TTTTGCGATGTGTTCCTAAT 	14
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	2
--------------------------------------------------------ATTGGGAACATTTTGCATAAA 	1
--------------------------------------------------------ATTGGGAACATTTTGCATA 	1
---------------------------------------------------------TTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
40	Mus musculus	GSM539876	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATAT 	34
---------------------TTTTGCGATGTGTTCCTAATA 	8
---------------------TTTTGCGATGTGTTCCTAAT 	14
--------------------------------------------------------ATTGGGGATGCTTTGCATTCAT 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
41	Mus musculus	GSM539854	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	25
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	4
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	2

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
42	Mus musculus	GSM539854	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	25
---------------------TTTTGCGATGTGTTCCTAATA 	2
---------------------TTTTGCGATGTGTTCCTAAT 	4

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
43	Mus musculus	GSM539874	TTTTGCGATGTGTTCCTAATAT	ATTGGGGATGCTTTGCATTCAT	up	5	0

Secondary structure

CAAACCAAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTATATTGGGGATGCTTTGCATTCATGGTTCTGCATCCATCATA
--AACCAAGATGCTGAACTAT 	1
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	74
---------------------TTTTGCGATGTGTTCCTAATA 	13
---------------------TTTTGCGATGTGTTCCTAA 	7
---------------------TTTTGCGATGTGTTCCTAAT 	23
--------------------------------------------------------ATTGGGGATGCTTTGCATT 	2
--------------------------------------------------------ATTGGGGATGCTTTGCATTC 	1

Overlaps with: MNEST032081
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-2
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
44	Mus musculus	GSM539874	TTTTGCGATGTGTTCCTAATAT	ATTGGGAACATTTTGCATAAAT	up	2	0

Secondary structure

CAAAGAGAGATACTGAGCTGTTTTTGCGATGTGTTCCTAATATGTGCTATAATTATATTGGGAACATTTTGCATAAATAGCTTTGTGTCAATACAC
---------------------TTTTGCGATGTGTTCCTAATATG 	1
---------------------TTTTGCGATGTGTTCCTAATAT 	74
---------------------TTTTGCGATGTGTTCCTAATA 	13
---------------------TTTTGCGATGTGTTCCTAA 	7
---------------------TTTTGCGATGTGTTCCTAAT 	23
--------------------------------------------------------ATTGGGAACATTTTGCATAAAT 	3
--------------------------------------------------------ATTGGGAACATTTTGCATAA 	1
---------------------------------------------------------TTGGGAACATTTTGCATAAAT 	1

Overlaps with: MNEST032080
Overlaps with miRBase pre-miRNAs: mmu-mir-450a-1
HuntMi prediction: true miRNA