miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TGAAGCTGCCAGCATGATCT

selected species: Oryza sativa



128 records found  

Showing records 101 - 128

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#specieslibrarymiRNAmiRNA*armmismatchesbulges
101 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
-----------------------------GATGAAGCTGCCAGCATGATCTGA 	1
------------------------------ATGAAGCTGCCAGCATGATCTGA 	8
------------------------------ATGAAGCTGCCAGCATGATCT 	4
-------------------------------TGAAGCTGCCAGCATGATC 	17
-------------------------------TGAAGCTGCCAGCATGATCT 	91
-------------------------------TGAAGCTGCCAGCATGATCTG 	75
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	12
-------------------------------TGAAGCTGCCAGCATGATCTGA 	15569
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
--------------------------------GAAGCTGCCAGCATGATCTG 	1
--------------------------------GAAGCTGCCAGCATGATCT 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	8
---------------------------------AAGCTGCCAGCATGATCTGA 	9
----------------------------------AGCTGCCAGCATGATCTGA 	21


Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
102 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTA GATCATGCATGACAGCCTCATT up 2 1


Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATC 	17
-------------------------------TGAAGCTGCCAGCATGATCT 	91
-------------------------------TGAAGCTGCCAGCATGATCTA 	1917
-------------------------------TGAAGCTGCCAGCATGATCTAG 	13
--------------------------------GAAGCTGCCAGCATGATCTA 	2
--------------------------------GAAGCTGCCAGCATGATCT 	1
-------------------------------------TGCCAGCATGATCTAGCTCT 	2
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	8
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1


Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
103 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-----------------------------GGTGAAGCTGCCAGCATGATCTGA 	3
-------------------------------TGAAGCTGCCAGCATGATC 	17
-------------------------------TGAAGCTGCCAGCATGATCTGATGA 	1
-------------------------------TGAAGCTGCCAGCATGATCT 	91
-------------------------------TGAAGCTGCCAGCATGATCTG 	75
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	12
-------------------------------TGAAGCTGCCAGCATGATCTGA 	15569
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
--------------------------------GAAGCTGCCAGCATGATCTG 	1
--------------------------------GAAGCTGCCAGCATGATCT 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	8
---------------------------------AAGCTGCCAGCATGATCTGA 	9
---------------------------------AAGCTGCCAGCATGATCTGATG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	21
----------------------------------AGCTGCCAGCATGATCTGATGA 	1
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCAT 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	12



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
104 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTGA 	7
-------------------------------TGAAGCTGCCAGCATGATC 	17
-------------------------------TGAAGCTGCCAGCATGATCTGATGA 	1
-------------------------------TGAAGCTGCCAGCATGATCT 	91
-------------------------------TGAAGCTGCCAGCATGATCTG 	75
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	12
-------------------------------TGAAGCTGCCAGCATGATCTGA 	15569
--------------------------------GAAGCTGCCAGCATGATCTGAT 	1
--------------------------------GAAGCTGCCAGCATGATCTG 	1
--------------------------------GAAGCTGCCAGCATGATCT 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	8
---------------------------------AAGCTGCCAGCATGATCTGA 	9
---------------------------------AAGCTGCCAGCATGATCTGATG 	1
----------------------------------AGCTGCCAGCATGATCTGA 	21
----------------------------------AGCTGCCAGCATGATCTGATGA 	1
----------------------------------------------------------------------------------------------------AGATCATGCTGTGCAGTTT 	1
---------------------------------------------------------------------------------------------------------ATGCTGTGCAGTTTCATCTGCT 	1


Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
105 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCTGG 	554
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTG 	75
---------------------TGAAGCTGCCAGCATGATCTGGT 	1
----------------------GAAGCTGCCAGCATGATCTGG 	2
----------------------GAAGCTGCCAGCATGATCTG 	1
----------------------GAAGCTGCCAGCATGATCT 	1
----------------------GAAGCTGCCAGCATGATCTGGT 	1
-----------------------AAGCTGCCAGCATGATCTGG 	1
------------------------AGCTGCCAGCATGATCTGG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	6
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCT 	1


Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
106 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAAA
-------------TGAGAGAATGAAGCTGCCAGC 	3
-------------TGAGAGAATGAAGCTGCCAG 	1
-------------------AATGAAGCTGCCAGCATGATCT 	3
--------------------ATGAAGCTGCCAGCATGATCT 	4
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCTGG 	554
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTG 	75
---------------------TGAAGCTGCCAGCATGATCTGGT 	1
----------------------GAAGCTGCCAGCATGATCTGG 	2
----------------------GAAGCTGCCAGCATGATCTG 	1
----------------------GAAGCTGCCAGCATGATCT 	1
----------------------GAAGCTGCCAGCATGATCTGGT 	1
-----------------------AAGCTGCCAGCATGATCTGG 	1
------------------------AGCTGCCAGCATGATCTGG 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATCATGTTGCAGCTTCA 	1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	6
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCT 	1


Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
107 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTA GGTCATGCTGCGGCAGCCTCACT up 1 2


Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTA 	1917
---------------------TGAAGCTGCCAGCATGATCTAG 	13
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCT 	1
---------------------------TGCCAGCATGATCTAGCTCT 	2
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	1


Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
108 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTA GATCATGCTGTGACAGTTTCACT up 1 2


Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTAA 	14
---------------------TGAAGCTGCCAGCATGATCTA 	1917
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCT 	1


Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
109 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
---------------------------------------GGTGAAGCTGCCAGCATGATCTGA 	3
-----------------------------------------TGAAGCTGCCAGCATGATC 	17
-----------------------------------------TGAAGCTGCCAGCATGATCT 	91
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	75
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	15569
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	3
------------------------------------------GAAGCTGCCAGCATGATCTG 	1
------------------------------------------GAAGCTGCCAGCATGATCT 	1
------------------------------------------GAAGCTGCCAGCATGATCTGA 	8
-------------------------------------------AAGCTGCCAGCATGATCTGA 	9
--------------------------------------------AGCTGCCAGCATGATCTGA 	21


Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
110 Oryza sativa GSM520637-18674 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	7
---------------------TGAAGCTGCCAGCATGATC 	17
---------------------TGAAGCTGCCAGCATGATCT 	91
---------------------TGAAGCTGCCAGCATGATCTG 	75
---------------------TGAAGCTGCCAGCATGATCTGAT 	12
---------------------TGAAGCTGCCAGCATGATCTGA 	15569
----------------------GAAGCTGCCAGCATGATCTGAT 	1
----------------------GAAGCTGCCAGCATGATCTG 	1
----------------------GAAGCTGCCAGCATGATCT 	1
----------------------GAAGCTGCCAGCATGATCTGA 	8
-----------------------AAGCTGCCAGCATGATCTGA 	9
------------------------AGCTGCCAGCATGATCTGA 	21



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
111 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
------------------------------ATGAAGCTGCCAGCATGATCTG 	1
------------------------------ATGAAGCTGCCAGCATGATCT 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	54
-------------------------------TGAAGCTGCCAGCATGATCTGA 	28384
-------------------------------TGAAGCTGCCAGCATGATCTG 	425
-------------------------------TGAAGCTGCCAGCATGATCT 	484
-------------------------------TGAAGCTGCCAGCATGATC 	108
-------------------------------TGAAGCTGCCAGCATGATCTGATC 	1
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
--------------------------------GAAGCTGCCAGCATGATCT 	4
--------------------------------GAAGCTGCCAGCATGATCTG 	2
---------------------------------AAGCTGCCAGCATGATCTGA 	18
-------------------------------------------------------------------------------------------------------TCAGATCATCTGGCAGTTTCA 	1
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	26


Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
112 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	54
-------------------------------TGAAGCTGCCAGCATGATCTGA 	28384
-------------------------------TGAAGCTGCCAGCATGATCTG 	425
-------------------------------TGAAGCTGCCAGCATGATCT 	484
-------------------------------TGAAGCTGCCAGCATGATC 	108
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
--------------------------------GAAGCTGCCAGCATGATCT 	4
--------------------------------GAAGCTGCCAGCATGATCTG 	2
---------------------------------AAGCTGCCAGCATGATCTGA 	18
----------------------------------AGCTGCCAGCATGATCTGATGA 	2
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	13
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCAT 	3
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATCT 	1



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
113 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTA GATCATGCATGACAGCCTCATT up 2 1


Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTA 	5526
-------------------------------TGAAGCTGCCAGCATGATCT 	484
-------------------------------TGAAGCTGCCAGCATGATC 	108
-------------------------------TGAAGCTGCCAGCATGATCTAG 	8
--------------------------------GAAGCTGCCAGCATGATCTA 	47
--------------------------------GAAGCTGCCAGCATGATCT 	4
---------------------------------AAGCTGCCAGCATGATCTA 	9
-------------------------------------------------------------------------------------------------------------------------------ATCATGCATGACAGCCTCATT 	1
--------------------------------------------------------------------------------------------------------------------------------TCATGCATGACAGCCTCATT 	1


Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
114 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTGA 	15
------------------------------CTGAAGCTGCCAGCATGATCTG 	1
------------------------------CTGAAGCTGCCAGCATGATC 	1
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	54
-------------------------------TGAAGCTGCCAGCATGATCTGA 	28384
-------------------------------TGAAGCTGCCAGCATGATCTG 	425
-------------------------------TGAAGCTGCCAGCATGATCT 	484
-------------------------------TGAAGCTGCCAGCATGATC 	108
--------------------------------GAAGCTGCCAGCATGATCTGA 	84
--------------------------------GAAGCTGCCAGCATGATCT 	4
--------------------------------GAAGCTGCCAGCATGATCTG 	2
---------------------------------AAGCTGCCAGCATGATCTGA 	18
----------------------------------AGCTGCCAGCATGATCTGATGA 	2


Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
115 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	170
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	28384
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	425
-----------------------------------------TGAAGCTGCCAGCATGATCT 	484
-----------------------------------------TGAAGCTGCCAGCATGATC 	108
-----------------------------------------TGAAGCTGCCAGCATGATCTGAAA 	16
------------------------------------------GAAGCTGCCAGCATGATCTGA 	84
------------------------------------------GAAGCTGCCAGCATGATCT 	4
------------------------------------------GAAGCTGCCAGCATGATCTG 	2
-------------------------------------------AAGCTGCCAGCATGATCTGA 	18
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	7
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCA 	2
-------------------------------------------------------------------------------------GATCATCCGGCAGCTTCATC 	7
-------------------------------------------------------------------------------------GATCATCCGGCAGCTTCATCTTC 	1
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	19


Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
116 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTA GGTCATGCTGCGGCAGCCTCACT up 1 2


Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTA 	5526
---------------------TGAAGCTGCCAGCATGATCT 	484
---------------------TGAAGCTGCCAGCATGATC 	108
---------------------TGAAGCTGCCAGCATGATCTAG 	8
----------------------GAAGCTGCCAGCATGATCTA 	47
----------------------GAAGCTGCCAGCATGATCT 	4
-----------------------AAGCTGCCAGCATGATCTA 	9
-------------------------------------------------------------------------------------------------------------------------------GGTCATGCTGCGGCAGCCTCACT 	7


Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
117 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTA GATCATGCTGTGACAGTTTCACT up 1 2


Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATCTA 	5526
---------------------TGAAGCTGCCAGCATGATCT 	484
---------------------TGAAGCTGCCAGCATGATC 	108
---------------------TGAAGCTGCCAGCATGATCTAA 	4
----------------------GAAGCTGCCAGCATGATCTA 	47
----------------------GAAGCTGCCAGCATGATCT 	4
-----------------------AAGCTGCCAGCATGATCTA 	9
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	3


Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
118 Oryza sativa GSM693279 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	15
--------------------CTGAAGCTGCCAGCATGATCTG 	1
--------------------CTGAAGCTGCCAGCATGATC 	1
---------------------TGAAGCTGCCAGCATGATCTGAT 	54
---------------------TGAAGCTGCCAGCATGATCTGA 	28384
---------------------TGAAGCTGCCAGCATGATCTG 	425
---------------------TGAAGCTGCCAGCATGATCT 	484
---------------------TGAAGCTGCCAGCATGATC 	108
---------------------TGAAGCTGCCAGCATGATCTGATC 	1
----------------------GAAGCTGCCAGCATGATCTGA 	84
----------------------GAAGCTGCCAGCATGATCT 	4
----------------------GAAGCTGCCAGCATGATCTG 	2
-----------------------AAGCTGCCAGCATGATCTGA 	18
--------------------------------------------------------------------------------------------------------AGATCGTGCTGCGCAGTTTCATC 	3
---------------------------------------------------------------------------------------------------------GATCGTGCTGCGCAGTTTCATC 	1



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
119 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGA AGATCATCTGGCAGTTTCATC up 0 1


Secondary structure

TCTCTCATATGTATGGTGCACCACAAGTGGATGAAGCTGCCAGCATGATCTGATCACAGTAGTTCTCTAGCTGATGATGATTTACAAAACCTAGAGACATGCATCAGATCATCTGGCAGTTTCATCTTCTCATGGCAGCACAAAAAGAGCTTAC
-----------------------------GATGAAGCTGCCAGCATGATCTGA 	5
------------------------------ATGAAGCTGCCAGCATGATCTGA 	15
-------------------------------TGAAGCTGCCAGCATGATC 	19
-------------------------------TGAAGCTGCCAGCATGATCTG 	299
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	16
-------------------------------TGAAGCTGCCAGCATGATCT 	272
-------------------------------TGAAGCTGCCAGCATGATCTGA 	113340
--------------------------------GAAGCTGCCAGCATGATCTGA 	128
---------------------------------AAGCTGCCAGCATGATCTGA 	57
----------------------------------AGCTGCCAGCATGATCTGA 	134
---------------------------------------------------------------------------------------------------------AGATCATCTGGCAGTTTCATC 	4


Overlaps with: MNEST041956 MNEST048864
Overlaps with miRBase pre-miRNAs: osa-MIR167f
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
120 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTA GATCATGCATGACAGCCTCATT up 2 1


Secondary structure

AGATGATGATGATGGTGCTAGTGTGAATGAGTGAAGCTGCCAGCATGATCTAGCTCTGATTAATCGGCACTGTTGGCGTACAGTCGATTGACTAATCGTCAGATCTGTGTGTGTAAATCACTGTTAGATCATGCATGACAGCCTCATTTCTTCACACTGTTGGGCATGTGTTAAAC
-------------------------------TGAAGCTGCCAGCATGATCTAG 	19
-------------------------------TGAAGCTGCCAGCATGATC 	19
-------------------------------TGAAGCTGCCAGCATGATCT 	272
-------------------------------TGAAGCTGCCAGCATGATCTA 	4893
--------------------------------GAAGCTGCCAGCATGATCTA 	2
---------------------------------AAGCTGCCAGCATGATCTA 	2
------------------------------------------------------------------------------------------------------------------------------GATCATGCATGACAGCCTCATT 	2


Overlaps with: MNEST041951 MNEST048858 MNEST048859
Overlaps with miRBase pre-miRNAs: osa-MIR167a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
121 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGA AGGTCATGCTGTAGTTTCATC up 0 1


Secondary structure

TAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAA
-------------------------------TGAAGCTGCCAGCATGATC 	19
-------------------------------TGAAGCTGCCAGCATGATCTG 	299
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	16
-------------------------------TGAAGCTGCCAGCATGATCT 	272
-------------------------------TGAAGCTGCCAGCATGATCTGA 	113340
--------------------------------GAAGCTGCCAGCATGATCTGA 	128
---------------------------------AAGCTGCCAGCATGATCTGA 	57
----------------------------------AGCTGCCAGCATGATCTGA 	134
-------------------------------------------------------------------------------------------------------------ATCAGGTCATGCTGTAGTTTC 	1
--------------------------------------------------------------------------------------------------------------TCAGGTCATGCTGTAGTTTCA 	3
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCA 	4
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCAT 	8
----------------------------------------------------------------------------------------------------------------AGGTCATGCTGTAGTTTCATC 	260
-----------------------------------------------------------------------------------------------------------------GGTCATGCTGTAGTTTCATCT 	2
-----------------------------------------------------------------------------------------------------------------GGTCATGCTGTAGTTTCATC 	7



HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
122 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGA AGATCATGCTGTGCAGTTTCATC up 0 1


Secondary structure

CCTTGATTGTTGAGGTGCAACCATTAGGAGCTGAAGCTGCCAGCATGATCTGATGAGTGCTTATTAGGTGAGGGCAGAATTGACTGCCAAAACAAAGATCAGATCATGCTGTGCAGTTTCATCTGCTTGTGGCTGCACAAAATTAAAGGGC
------------------------------CTGAAGCTGCCAGCATGATCTGA 	42
-------------------------------TGAAGCTGCCAGCATGATC 	19
-------------------------------TGAAGCTGCCAGCATGATCTG 	299
-------------------------------TGAAGCTGCCAGCATGATCTGAT 	16
-------------------------------TGAAGCTGCCAGCATGATCT 	272
-------------------------------TGAAGCTGCCAGCATGATCTGA 	113340
--------------------------------GAAGCTGCCAGCATGATCTGA 	128
---------------------------------AAGCTGCCAGCATGATCTGA 	57
----------------------------------AGCTGCCAGCATGATCTGA 	134
-----------------------------------------------------------------------------------------------------GATCATGCTGTGCAGTTTCATC 	4


Overlaps with: MNEST050424
Overlaps with miRBase pre-miRNAs: osa-MIR167d
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
123 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

GTTCTTGCTGGTGTGAGAGGCTGAAGCTGCCAGCATGATCTGGTCCATGAGTTGCACTGCTGAATATATTGAATTCAGCCAGGAGCTGCTACTGCAGTTCTGATCTCGATCTGCATTCGTTGTTCTGAGCTATGTATGGATTTGATCGGTTTGAAGGCATCCATGTCTTTAATTTCATCGATCAGATCATGTTGCAGCTTCACTCTCTCACTACCAGCAAAA
---------------------TGAAGCTGCCAGCATGATCTGGT 	4
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCTGG 	638
---------------------TGAAGCTGCCAGCATGATCTG 	299
---------------------TGAAGCTGCCAGCATGATCT 	272
------------------------AGCTGCCAGCATGATCTGG 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	34
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	3


Overlaps with: MNEST041959 MNEST048867
Overlaps with miRBase pre-miRNAs: osa-MIR167i
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
124 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGG AGATCATGTTGCAGCTTCACT up 0 1


Secondary structure

AGTTTTGCTGGTGTGAGAGAATGAAGCTGCCAGCATGATCTGGTTGTCAGGCATGAGCCAAATCTATCCATGGTGTTGGTGGTACTGAAATTACCGCGTTTTCGAGGTTTTTCGTCGTGTCAACTTGCGAAGGGAATTACGGGTTCTTGATGAGCATTGGTGATAGGAGGTGTGGGCTTGGTTAGTAGAGGTAGAATTATGATTGTTCTTGTGAGTTTCAGTAAGAGGTGGGAGTGATTGGAATTTGGCTCCATCAGATCATGTTGCAGCTTCACTCTCTCACCACCAACAAA
-------------TGAGAGAATGAAGCTGCCAGC 	1
-------------------AATGAAGCTGCCAGCATGATCT 	10
---------------------TGAAGCTGCCAGCATGATCTGGT 	4
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCTGG 	638
---------------------TGAAGCTGCCAGCATGATCTG 	299
---------------------TGAAGCTGCCAGCATGATCT 	272
-----------------------AAGCTGCCAGCATGATCTGGTT 	3
------------------------AGCTGCCAGCATGATCTGG 	2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCATGTTGCAGCTTCACT 	34
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGTTGCAGCTTCACTCTC 	3


Overlaps with: MNEST041955 MNEST048863
Overlaps with miRBase pre-miRNAs: osa-MIR167e
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
125 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTA GGTCATGCTGCGGCAGCCTCACT up 1 2


Secondary structure

TGAACTGTCCAAGGGAACGAGTGAAGCTGCCAGCATGATCTAGCTCTGAATGATCAACAAGATGTGCTCCCACACTGCCTTCCTGTGGATCTTGAGCTGTTGCTAGTCTTGTGGTCATGCCTTGCTAGGTCATGCTGCGGCAGCCTCACTTCTTCCCATTGTTGGGCA
---------------------TGAAGCTGCCAGCATGATCTAG 	19
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCT 	272
---------------------TGAAGCTGCCAGCATGATCTA 	4893
----------------------GAAGCTGCCAGCATGATCTA 	2
-----------------------AAGCTGCCAGCATGATCTA 	2
----------------------------------------------------------------------------------------------------------TCTTGTGGTCATGCCTTGCTA 	7


Overlaps with: MNEST041953 MNEST048861
Overlaps with miRBase pre-miRNAs: osa-MIR167c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
126 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTA GATCATGCTGTGACAGTTTCACT up 1 2


Secondary structure

TCCGGTGCCCAAGAGAAAGCGTGAAGCTGCCAGCATGATCTAACTTGCAGACAAGAAATCAGCTCAGCTCGCTGGTTTCGAACAGGAAGGCGGCTAGCTGAGGCTTCTTCTGAGTACGTGATGGTTAGATCATGCTGTGACAGTTTCACTCCTTCCCTGTTGGGCACA
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCTAACT 	3
---------------------TGAAGCTGCCAGCATGATCTAA 	90
---------------------TGAAGCTGCCAGCATGATCT 	272
---------------------TGAAGCTGCCAGCATGATCTA 	4893
----------------------GAAGCTGCCAGCATGATCTA 	2
----------------------GAAGCTGCCAGCATGATCTAA 	1
-----------------------AAGCTGCCAGCATGATCTA 	2
------------------------AGCTGCCAGCATGATCTAA 	1
-------------------------------------------------------------------------------------------------------------------------------GATCATGCTGTGACAGTTTCACT 	3
--------------------------------------------------------------------------------------------------------------------------------ATCATGCTGTGACAGTTTCACT 	16


Overlaps with: MNEST041952 MNEST048860
Overlaps with miRBase pre-miRNAs: osa-MIR167b
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
127 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGA AGATCATCCGGCAGCTTCATC up 2 1


Secondary structure

GATGGGCTGTTAATTCGCTTTGTTTGTGCGCCATAAGCAGGTGAAGCTGCCAGCATGATCTGAAAGCATCTCAAACCAGCGATCAGATCATCCGGCAGCTTCATCTTCTCATGGCAGCACACCAGCTTGATTGATTGATGATG
--------------------------------------AGGTGAAGCTGCCAGCATGATCTGA 	2
-----------------------------------------TGAAGCTGCCAGCATGATCTGAA 	12
-----------------------------------------TGAAGCTGCCAGCATGATC 	19
-----------------------------------------TGAAGCTGCCAGCATGATCTG 	299
-----------------------------------------TGAAGCTGCCAGCATGATCT 	272
-----------------------------------------TGAAGCTGCCAGCATGATCTGA 	113340
------------------------------------------GAAGCTGCCAGCATGATCTGA 	128
-------------------------------------------AAGCTGCCAGCATGATCTGA 	57
--------------------------------------------AGCTGCCAGCATGATCTGA 	134
------------------------------------------------------------------------------------AGATCATCCGGCAGCTTCATC 	12
---------------------------------------------------------------------------------------TCATCCGGCAGCTTCATCTTC 	8


Overlaps with: MNEST041957 MNEST048865
Overlaps with miRBase pre-miRNAs: osa-MIR167g
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
128 Oryza sativa GSM520639-18678 TGAAGCTGCCAGCATGATCTGA AGATCGTGCTGCGCAGTTTCATC up 0 1


Secondary structure

GATGTGTGCACCTTAAGCAGCTGAAGCTGCCAGCATGATCTGATCTTTTGCGATCTCTTTTTTTATCTGAATAAGTTGATGGAAATATTGGGTTCCTAAGATTCAGATCGTGCTGCGCAGTTTCATCTGCTAATCGATGCACTAC
--------------------CTGAAGCTGCCAGCATGATCTGA 	42
---------------------TGAAGCTGCCAGCATGATC 	19
---------------------TGAAGCTGCCAGCATGATCTG 	299
---------------------TGAAGCTGCCAGCATGATCTGAT 	16
---------------------TGAAGCTGCCAGCATGATCT 	272
---------------------TGAAGCTGCCAGCATGATCTGA 	113340
----------------------GAAGCTGCCAGCATGATCTGA 	128
-----------------------AAGCTGCCAGCATGATCTGA 	57
------------------------AGCTGCCAGCATGATCTGA 	134



HuntMi prediction: true miRNA