miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: TGACAGAAGAGAGTGAGCAC

selected species: Oryza sativa

104 records found

Showing records 51 - 100

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#	species	library	miRNA	miRNA*	arm	mismatches	bulges
51	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
-------------------GGTGACAGAAGAGAGTGAGCAC 	2
--------------------GTGACAGAAGAGAGTGAGCAC 	13
---------------------TGACAGAAGAGAGTGAGCACA 	2113
---------------------TGACAGAAGAGAGTGAGCAC 	1542111
---------------------TGACAGAAGAGAGTGAGCA 	7594
----------------------GACAGAAGAGAGTGAGCACA 	53
----------------------GACAGAAGAGAGTGAGCAC 	2325
-----------------------ACAGAAGAGAGTGAGCACA 	15

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
52	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
------------------CGGTGACAGAAGAGAGTGAGCAC 	10
------------------CGGTGACAGAAGAGAGTGA 	1
-------------------GGTGACAGAAGAGAGTGAGCAC 	2
--------------------GTGACAGAAGAGAGTGAGCAC 	13
---------------------TGACAGAAGAGAGTGAGCACA 	2113
---------------------TGACAGAAGAGAGTGAGCAC 	1542111
---------------------TGACAGAAGAGAGTGAGCA 	7594
----------------------GACAGAAGAGAGTGAGCACA 	53
----------------------GACAGAAGAGAGTGAGCAC 	2325
-----------------------ACAGAAGAGAGTGAGCACA 	15
--------------------------------------------------------------------------------------TGCTCACTGCTCTGTCTGTCATC 	3
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATCC 	2
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATC 	7

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
53	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACC	up	1	2

Secondary structure

AATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATC
-----------------------------ATTGACAGAAGAGAGTGAGCAC 	78
-----------------------------ATTGACAGAAGAGAGTGAGCA 	6
-----------------------------ATTGACAGAAGAGAGTGAGC 	1
------------------------------TTGACAGAAGAGAGTGAGCACA 	24
------------------------------TTGACAGAAGAGAGTGAGCAC 	62502
------------------------------TTGACAGAAGAGAGTGAGCA 	461
------------------------------TTGACAGAAGAGAGTGAGC 	205
-------------------------------TGACAGAAGAGAGTGAGCACA 	2113
-------------------------------TGACAGAAGAGAGTGAGCAC 	1542111
-------------------------------TGACAGAAGAGAGTGAGCA 	7594
--------------------------------GACAGAAGAGAGTGAGCACA 	53
--------------------------------GACAGAAGAGAGTGAGCAC 	2325
---------------------------------ACAGAAGAGAGTGAGCACA 	15

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
54	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
--------------------------GAGGCTGACAGAAGAGAGTGA 	1
---------------------------AGGCTGACAGAAGAGAGTGA 	1
-----------------------------GCTGACAGAAGAGAGTGAGCAC 	3
-----------------------------GCTGACAGAAGAGAGTGAGCA 	1
-----------------------------GCTGACAGAAGAGAGTGAGC 	1
------------------------------CTGACAGAAGAGAGTGAGCACACA 	1
------------------------------CTGACAGAAGAGAGTGAGCACA 	4
------------------------------CTGACAGAAGAGAGTGAGCAC 	3797
------------------------------CTGACAGAAGAGAGTGAGCA 	95
------------------------------CTGACAGAAGAGAGTGAGC 	18
-------------------------------TGACAGAAGAGAGTGAGCACA 	2113
-------------------------------TGACAGAAGAGAGTGAGCAC 	1542111
-------------------------------TGACAGAAGAGAGTGAGCA 	7594
--------------------------------GACAGAAGAGAGTGAGCACA 	53
--------------------------------GACAGAAGAGAGTGAGCAC 	2325
---------------------------------ACAGAAGAGAGTGAGCACA 	15
-------------------------------------------------------GGTGACTTTCTTGCATGCT 	1
---------------------------------------------------------TGACTTTCTTGCATGCTGAA 	1
-----------------------------------------------------------------------------TGGACTCATGCTTGAAGCTAT 	1
-----------------------------------------------------------------------------------------------------TGCTCACTTCTCTCTCTGTCAGC 	5
-----------------------------------------------------------------------------------------------------TGCTCACTTCTCTCTCTGTCAG 	1
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	213
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAG 	5
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCA 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
55	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
---------------------------------------------GAGGTCTGACAGAAGAGAGTGAG 	1
----------------------------------------------AGGTCTGACAGAAGAGAGTGA 	2
-----------------------------------------------GGTCTGACAGAAGAGAGTGAGCAC 	1
------------------------------------------------GTCTGACAGAAGAGAGTGAGCAC 	1
-------------------------------------------------TCTGACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------TCTGACAGAAGAGAGTGAGCAC 	730
-------------------------------------------------TCTGACAGAAGAGAGTGAGCA 	9
-------------------------------------------------TCTGACAGAAGAGAGTGAGC 	5
-------------------------------------------------TCTGACAGAAGAGAGTGAG 	1
--------------------------------------------------CTGACAGAAGAGAGTGAGCACACA 	1
--------------------------------------------------CTGACAGAAGAGAGTGAGCACA 	4
--------------------------------------------------CTGACAGAAGAGAGTGAGCAC 	3797
--------------------------------------------------CTGACAGAAGAGAGTGAGCA 	95
--------------------------------------------------CTGACAGAAGAGAGTGAGC 	18
---------------------------------------------------TGACAGAAGAGAGTGAGCACA 	2113
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	1542111
---------------------------------------------------TGACAGAAGAGAGTGAGCA 	7594
----------------------------------------------------GACAGAAGAGAGTGAGCACA 	53
----------------------------------------------------GACAGAAGAGAGTGAGCAC 	2325
-----------------------------------------------------ACAGAAGAGAGTGAGCACA 	15
----------------------------------------------------------------------------------------------------------------------GCTCACTCTCTATCTGTCAGC 	40

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
56	Oryza sativa	GSM686039-31370	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
---------GGTGACAGAAGAGAGTGAGCAC 	2
----------GTGACAGAAGAGAGTGAGCAC 	13
-----------TGACAGAAGAGAGTGAGCACA 	2113
-----------TGACAGAAGAGAGTGAGCAC 	1542111
-----------TGACAGAAGAGAGTGAGCA 	7594
------------GACAGAAGAGAGTGAGCACA 	53
------------GACAGAAGAGAGTGAGCAC 	2325
-------------ACAGAAGAGAGTGAGCACA 	15
--------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCACC 	1
--------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCA 	1

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
57	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
-----------TGACAGAAGAGAGTGAGCACA 	1
-----------TGACAGAAGAGAGTGAGCAC 	22
-----------TGACAGAAGAGAGTGAGCA 	1
-------------ACAGAAGAGAGTGAGCACA 	1
----------------------------------------------------------------------------------------------------TGCTCACTTCTCTCTCTGTCAGC 	2
-----------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
58	Oryza sativa	GSM520634-18667	TTGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGCA	up	1	2

Secondary structure

GTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCC
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCAC 	34
--------------------------------------------------------------TGACAGAAGAGAGTGAGCACA 	1
--------------------------------------------------------------TGACAGAAGAGAGTGAGCAC 	22
--------------------------------------------------------------TGACAGAAGAGAGTGAGCA 	1
----------------------------------------------------------------ACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	4
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAGC 	2

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
59	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
---------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------TGACAGAAGAGAGTGAGCAC 	22
---------------------TGACAGAAGAGAGTGAGCA 	1
-----------------------ACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
60	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
---------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------TGACAGAAGAGAGTGAGCAC 	22
---------------------TGACAGAAGAGAGTGAGCA 	1
-----------------------ACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
61	Oryza sativa	GSM520634-18667	TTGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACCC	up	2	2

Secondary structure

AAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATCC
-------------------------------TTGACAGAAGAGAGTGAGCACA 	1
-------------------------------TTGACAGAAGAGAGTGAGCAC 	34
--------------------------------TGACAGAAGAGAGTGAGCACA 	1
--------------------------------TGACAGAAGAGAGTGAGCAC 	22
--------------------------------TGACAGAAGAGAGTGAGCA 	1
----------------------------------ACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
62	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
-------------------------------TGACAGAAGAGAGTGAGCACA 	1
-------------------------------TGACAGAAGAGAGTGAGCAC 	22
-------------------------------TGACAGAAGAGAGTGAGCA 	1
---------------------------------ACAGAAGAGAGTGAGCACA 	1
-----------------------------------------------------------------------------------------------------TGCTCACTTCTCTCTCTGTCAGC 	2
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
63	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
---------------------------------------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	22
---------------------------------------------------TGACAGAAGAGAGTGAGCA 	1
-----------------------------------------------------ACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
64	Oryza sativa	GSM520634-18667	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
-----------TGACAGAAGAGAGTGAGCACA 	1
-----------TGACAGAAGAGAGTGAGCAC 	22
-----------TGACAGAAGAGAGTGAGCA 	1
-------------ACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
65	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
----------CTGACAGAAGAGAGTGAGCAC 	1
-----------TGACAGAAGAGAGTGAGCACA 	6
-----------TGACAGAAGAGAGTGAGCAC 	239
-----------TGACAGAAGAGAGTGAGCA 	2
------------GACAGAAGAGAGTGAGCACA 	1
----------------GAAGAGAGTGAGCACACAGCGGGCA 	1
------------------AGAGAGTGAGCACACAGCGGGCAG 	1
-----------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	7

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
66	Oryza sativa	GSM520636-18672	TTGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGCA	up	1	2

Secondary structure

GTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCC
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCA 	6
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCAC 	258
--------------------------------------------------------------TGACAGAAGAGAGTGAGCACA 	6
--------------------------------------------------------------TGACAGAAGAGAGTGAGCAC 	239
--------------------------------------------------------------TGACAGAAGAGAGTGAGCA 	2
---------------------------------------------------------------GACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	28
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAGC 	4
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGC 	1

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
67	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
---------------------TGACAGAAGAGAGTGAGCACA 	6
---------------------TGACAGAAGAGAGTGAGCAC 	239
---------------------TGACAGAAGAGAGTGAGCA 	2
----------------------GACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
68	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
---------------------TGACAGAAGAGAGTGAGCACA 	6
---------------------TGACAGAAGAGAGTGAGCAC 	239
---------------------TGACAGAAGAGAGTGAGCA 	2
----------------------GACAGAAGAGAGTGAGCACA 	1
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATC 	2

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
69	Oryza sativa	GSM520636-18672	TTGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACCC	up	2	2

Secondary structure

AAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATCC
------------------------------ATTGACAGAAGAGAGTGAGCAC 	1
-------------------------------TTGACAGAAGAGAGTGAGCACA 	1
-------------------------------TTGACAGAAGAGAGTGAGCA 	6
-------------------------------TTGACAGAAGAGAGTGAGCAC 	258
--------------------------------TGACAGAAGAGAGTGAGCACA 	6
--------------------------------TGACAGAAGAGAGTGAGCAC 	239
--------------------------------TGACAGAAGAGAGTGAGCA 	2
---------------------------------GACAGAAGAGAGTGAGCACA 	1
-----------------------------------------------------------------------------------------------TGCTCACTCCTCTTTCTGTCAC 	1
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACC 	3
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACCC 	1

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
70	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
--------------------------------------------------CTGACAGAAGAGAGTGAGCAC 	1
---------------------------------------------------TGACAGAAGAGAGTGAGCACA 	6
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	239
---------------------------------------------------TGACAGAAGAGAGTGAGCA 	2
----------------------------------------------------GACAGAAGAGAGTGAGCACA 	1
----------------------------------------------------------------------------------------------------------------------GCTCACTCTCTATCTGTCAGC 	1

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
71	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
------------------------------CTGACAGAAGAGAGTGAGCAC 	1
-------------------------------TGACAGAAGAGAGTGAGCACA 	6
-------------------------------TGACAGAAGAGAGTGAGCAC 	239
-------------------------------TGACAGAAGAGAGTGAGCA 	2
--------------------------------GACAGAAGAGAGTGAGCACA 	1
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	7

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
72	Oryza sativa	GSM520636-18672	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
-----------TGACAGAAGAGAGTGAGCACA 	6
-----------TGACAGAAGAGAGTGAGCAC 	239
-----------TGACAGAAGAGAGTGAGCA 	2
------------GACAGAAGAGAGTGAGCACA 	1

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
73	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
-----------TGACAGAAGAGAGTGAGCACA 	1
-----------TGACAGAAGAGAGTGAGCAC 	58
------------GACAGAAGAGAGTGAGCACA 	6
----------------GAAGAGAGTGAGCACACAGCGGG 	4
----------------GAAGAGAGTGAGCACACAGCGGGCA 	2
----------------GAAGAGAGTGAGCACACAGCGGGC 	15
------------------AGAGAGTGAGCACACAGCGGGCAGA 	1
------------------AGAGAGTGAGCACACAGCGGGCA 	1
------------------AGAGAGTGAGCACACAGCG 	1
--------------------AGAGTGAGCACACAGCGGGCAGA 	1
--------------------AGAGTGAGCACACAGCGGGCAGAC 	1
--------------------AGAGTGAGCACACAGCGGGCAG 	1
--------------------------AGCACACAGCGGGCAGACTGCATC 	1
-------------------------------------------------------------------------------------------GCCGTTGCGTGCTCACTTCTCT 	1
-------------------------------------------------------------------------------------------------GCGTGCTCACTTCTCTCTCTGT 	2
-----------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	4

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
74	Oryza sativa	GSM520635-18669	TTGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGCA	up	1	2

Secondary structure

GTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCC
-------------------------------------------------------AGATTGTTGACAGAAGAGAGTG 	7
--------------------------------------------------------GATTGTTGACAGAAGAGAGTGAG 	8
--------------------------------------------------------GATTGTTGACAGAAGAGAGTGAGCA 	2
--------------------------------------------------------GATTGTTGACAGAAGAGAGTG 	1
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCACA 	6
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCA 	3
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCAC 	87
--------------------------------------------------------------TGACAGAAGAGAGTGAGCACA 	1
--------------------------------------------------------------TGACAGAAGAGAGTGAGCAC 	58
---------------------------------------------------------------GACAGAAGAGAGTGAGCACA 	6
-----------------------------------------------------------------------------------------------------------------------------CGTGCTCGCTCCTCTTTCTGTCAGCA 	1
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	15
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAGC 	1
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGCA 	6
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGCAT 	1
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGC 	8

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
75	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
---------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------TGACAGAAGAGAGTGAGCAC 	58
----------------------GACAGAAGAGAGTGAGCACA 	6

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
76	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
---------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------TGACAGAAGAGAGTGAGCAC 	58
----------------------GACAGAAGAGAGTGAGCACA 	6
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATC 	1

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
77	Oryza sativa	GSM520635-18669	TTGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACCC	up	2	2

Secondary structure

AAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATCC
-------------------GCTCTCATGAGATTGACAGAAGAG 	1
------------------------------ATTGACAGAAGAGAGTGAGCACA 	5
------------------------------ATTGACAGAAGAGAGTGAGCAC 	43
-------------------------------TTGACAGAAGAGAGTGAGCACA 	6
-------------------------------TTGACAGAAGAGAGTGAGCA 	3
-------------------------------TTGACAGAAGAGAGTGAGCAC 	87
--------------------------------TGACAGAAGAGAGTGAGCACA 	1
--------------------------------TGACAGAAGAGAGTGAGCAC 	58
---------------------------------GACAGAAGAGAGTGAGCACA 	6
--------------------------------------------GTGAGCACACGGCGTGATGGCCGG 	1
--------------------------------------------------------------------------ATCTATCCCGTCCTCGCCGCGT 	1
---------------------------------------------------------------------------------------------CGTGCTCACTCCTCTTTCTGTC 	1
-----------------------------------------------------------------------------------------------TGCTCACTCCTCTTTCTGTCACCC 	1
-----------------------------------------------------------------------------------------------TGCTCACTCCTCTTTCTGTCACC 	1
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACCC 	57
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACCCT 	2
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACC 	4

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
78	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
---------------------------------------------------TGACAGAAGAGAGTGAGCACA 	1
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	58
----------------------------------------------------GACAGAAGAGAGTGAGCACA 	6

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
79	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
-------------------------------TGACAGAAGAGAGTGAGCACA 	1
-------------------------------TGACAGAAGAGAGTGAGCAC 	58
--------------------------------GACAGAAGAGAGTGAGCACA 	6
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	4

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
80	Oryza sativa	GSM520635-18669	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
-----------TGACAGAAGAGAGTGAGCACA 	1
-----------TGACAGAAGAGAGTGAGCAC 	58
------------GACAGAAGAGAGTGAGCACA 	6
----------------------------------------------------------------------------GCGTGCTCACTTCTCTCTCTGT 	2

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
81	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
----------CTGACAGAAGAGAGTGAGCAC 	1
-----------TGACAGAAGAGAGTGAGCAC 	45
-----------TGACAGAAGAGAGTGAGCA 	1
------------GACAGAAGAGAGTGAGCACA 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
82	Oryza sativa	GSM520637-18674	TTGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGCA	up	1	2

Secondary structure

GTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCC
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCA 	2
-------------------------------------------------------------TTGACAGAAGAGAGTGAGC 	4
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCAC 	175
--------------------------------------------------------------TGACAGAAGAGAGTGAGCAC 	45
--------------------------------------------------------------TGACAGAAGAGAGTGAGCA 	1
---------------------------------------------------------------GACAGAAGAGAGTGAGCACA 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	1

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
83	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
---------------------TGACAGAAGAGAGTGAGCAC 	45
---------------------TGACAGAAGAGAGTGAGCA 	1
----------------------GACAGAAGAGAGTGAGCACA 	2

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
84	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
---------------------TGACAGAAGAGAGTGAGCAC 	45
---------------------TGACAGAAGAGAGTGAGCA 	1
----------------------GACAGAAGAGAGTGAGCACA 	2
--------------------------------------------------------------------------------------TGCTCACTGCTCTGTCTGTCATC 	1

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
85	Oryza sativa	GSM520637-18674	TTGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACCC	up	2	2

Secondary structure

AAATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATCC
--ATTTCTAGCACGGAGAAGCTCTCA 	1
-------------------------------TTGACAGAAGAGAGTGAGCA 	2
-------------------------------TTGACAGAAGAGAGTGAGC 	4
-------------------------------TTGACAGAAGAGAGTGAGCAC 	175
--------------------------------TGACAGAAGAGAGTGAGCAC 	45
--------------------------------TGACAGAAGAGAGTGAGCA 	1
---------------------------------GACAGAAGAGAGTGAGCACA 	2
------------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACC 	2

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
86	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
--------------------------------------------------CTGACAGAAGAGAGTGAGCAC 	1
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	45
---------------------------------------------------TGACAGAAGAGAGTGAGCA 	1
----------------------------------------------------GACAGAAGAGAGTGAGCACA 	2
----------------------------------------------------------------------------------------------------------------------GCTCACTCTCTATCTGTCAGC 	1

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
87	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
------------------------------CTGACAGAAGAGAGTGAGCAC 	1
-------------------------------TGACAGAAGAGAGTGAGCAC 	45
-------------------------------TGACAGAAGAGAGTGAGCA 	1
--------------------------------GACAGAAGAGAGTGAGCACA 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
88	Oryza sativa	GSM520637-18674	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
-----------TGACAGAAGAGAGTGAGCAC 	45
-----------TGACAGAAGAGAGTGAGCA 	1
------------GACAGAAGAGAGTGAGCACA 	2

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
89	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
----------CTGACAGAAGAGAGTGAGCAC 	122
-----------TGACAGAAGAGAGTGAGCACA 	340
-----------TGACAGAAGAGAGTGAGCAC 	146083
-----------TGACAGAAGAGAGTGAGCA 	228
------------GACAGAAGAGAGTGAGCAC 	398
------------GACAGAAGAGAGTGAGCACA 	12
-----------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	8

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
90	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGC	up	1	2

Secondary structure

GCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTC
--------------AGATTGTTGACAGAAGAGAGTG 	1
---------------GATTGTTGACAGAAGAGAGTGAG 	1
----------------ATTGTTGACAGAAGAGAGTGA 	1
-----------------TTGTTGACAGAAGAGAGTGAG 	8
------------------TGTTGACAGAAGAGAGTGAGC 	10
------------------TGTTGACAGAAGAGAGTGAGCAC 	2
--------------------TTGACAGAAGAGAGTGAGCAC 	35339
--------------------TTGACAGAAGAGAGTGAGCA 	193
--------------------TTGACAGAAGAGAGTGAGC 	29
--------------------TTGACAGAAGAGAGTGAGCACA 	12
--------------------TTGACAGAAGAGAGTGAGCACAC 	1
---------------------TGACAGAAGAGAGTGAGCACA 	340
---------------------TGACAGAAGAGAGTGAGCAC 	146083
---------------------TGACAGAAGAGAGTGAGCA 	228
----------------------GACAGAAGAGAGTGAGCAC 	398
----------------------GACAGAAGAGAGTGAGCACA 	12
----------------------------AGAGAGTGAGCACACGGCG 	1
--------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	10
--------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAGC 	2
---------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGC 	6
---------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGCA 	4
---------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAG 	1

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
91	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
-------------------GGTGACAGAAGAGAGTGAGCAC 	2
--------------------GTGACAGAAGAGAGTGAGCAC 	5
---------------------TGACAGAAGAGAGTGAGCACA 	340
---------------------TGACAGAAGAGAGTGAGCAC 	146083
---------------------TGACAGAAGAGAGTGAGCA 	228
----------------------GACAGAAGAGAGTGAGCAC 	398
----------------------GACAGAAGAGAGTGAGCACA 	12
--------------------------------------------------------------------------------------TGCTCACTGCTCTTTCTGTCATC 	1
---------------------------------------------------------------------------------------GCTCACTGCTCTTTCTGTCATC 	2

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
92	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
------------------CGGTGACAGAAGAGAGTGAGCAC 	8
-------------------GGTGACAGAAGAGAGTGAGCAC 	2
--------------------GTGACAGAAGAGAGTGAGCAC 	5
---------------------TGACAGAAGAGAGTGAGCACA 	340
---------------------TGACAGAAGAGAGTGAGCAC 	146083
---------------------TGACAGAAGAGAGTGAGCA 	228
----------------------GACAGAAGAGAGTGAGCAC 	398
----------------------GACAGAAGAGAGTGAGCACA 	12
--------------------------------------------------------------------------------------TGCTCACTGCTCTGTCTGTCATC 	6
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATC 	14
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATCC 	1
-----------------------------------------------------------------------------------------TCACTGCTCTGTCTGTCATC 	2

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
93	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTCCTCTTTCTGTCACC	up	1	2

Secondary structure

AATTTCTAGCACGGAGAAGCTCTCATGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGGCCGGCATAAAATCTATCCCGTCCTCGCCGCGTGCTCACTCCTCTTTCTGTCACCCTCTTTCTCTCAGGGCTCAACTCCTATC
-----------------------------ATTGACAGAAGAGAGTGAGCAC 	18
------------------------------TTGACAGAAGAGAGTGAGCAC 	35339
------------------------------TTGACAGAAGAGAGTGAGCA 	193
------------------------------TTGACAGAAGAGAGTGAGC 	29
------------------------------TTGACAGAAGAGAGTGAGCACA 	12
------------------------------TTGACAGAAGAGAGTGAGCACAC 	1
-------------------------------TGACAGAAGAGAGTGAGCACA 	340
-------------------------------TGACAGAAGAGAGTGAGCAC 	146083
-------------------------------TGACAGAAGAGAGTGAGCA 	228
--------------------------------GACAGAAGAGAGTGAGCAC 	398
--------------------------------GACAGAAGAGAGTGAGCACA 	12
--------------------------------------AGAGAGTGAGCACACGGCG 	1
----------------------------------------------------------------------------------------------TGCTCACTCCTCTTTCTGTCA 	1
-----------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACC 	10
-----------------------------------------------------------------------------------------------GCTCACTCCTCTTTCTGTCACCC 	5

Overlaps with: MNEST041907 MNEST048804
Overlaps with miRBase pre-miRNAs: osa-MIR156d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
94	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTCTCTATCTGTCAGC	up	0	1

Secondary structure

TCAGTTAATTTGTCTTGAGAGGGGAAGAGATCTCTATGGGTTTTGGAGGTCTGACAGAAGAGAGTGAGCACACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGTGCTCACTCTCTATCTGTCAGCCGTTCACCATGCCCAATATGATTAATCTCCTTCTCTCAGTTGACAGTA
---------------------------------------------GAGGTCTGACAGAAGAGAGTGA 	1
-------------------------------------------------TCTGACAGAAGAGAGTGAGCAC 	6
--------------------------------------------------CTGACAGAAGAGAGTGAGCAC 	122
---------------------------------------------------TGACAGAAGAGAGTGAGCACA 	340
---------------------------------------------------TGACAGAAGAGAGTGAGCAC 	146083
---------------------------------------------------TGACAGAAGAGAGTGAGCA 	228
----------------------------------------------------GACAGAAGAGAGTGAGCAC 	398
----------------------------------------------------GACAGAAGAGAGTGAGCACA 	12
----------------------------------------------------------------------------------------------------------------------GCTCACTCTCTATCTGTCAGC 	12
----------------------------------------------------------------------------------------------------------------------GCTCACTCTCTATCTGTCAGCC 	1

Overlaps with: MNEST049442
Overlaps with miRBase pre-miRNAs: osa-MIR156b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
95	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

TTAGGAGGAAGAGAGGGGTGAGAGGTGAGGCTGACAGAAGAGAGTGAGCACACATGGTGACTTTCTTGCATGCTGAATGGACTCATGCTTGAAGCTATGTGTGCTCACTTCTCTCTCTGTCAGCCATTTGATCTCTCTTTCTCTCTTTCTCC
------------------------------CTGACAGAAGAGAGTGAGCAC 	122
-------------------------------TGACAGAAGAGAGTGAGCACA 	340
-------------------------------TGACAGAAGAGAGTGAGCAC 	146083
-------------------------------TGACAGAAGAGAGTGAGCA 	228
--------------------------------GACAGAAGAGAGTGAGCAC 	398
--------------------------------GACAGAAGAGAGTGAGCACA 	12
------------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	8

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
96	Oryza sativa	GSM693279	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCACC	up	0	2

Secondary structure

TACTAGGAGGGTGACAGAAGAGAGTGAGCACACGTGGTTGTTTCCTTGCATAAATGATGCCTATGCTTGGAGCTACGCGTGCTCACTTCTCTCTCTGTCACCTCCACCCC
---------GGTGACAGAAGAGAGTGAGCAC 	2
----------GTGACAGAAGAGAGTGAGCAC 	5
-----------TGACAGAAGAGAGTGAGCACA 	340
-----------TGACAGAAGAGAGTGAGCAC 	146083
-----------TGACAGAAGAGAGTGAGCA 	228
------------GACAGAAGAGAGTGAGCAC 	398
------------GACAGAAGAGAGTGAGCACA 	12

Overlaps with: MNEST041904 MNEST048801 MNEST049326
Overlaps with miRBase pre-miRNAs: osa-MIR156a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
97	Oryza sativa	GSM520639-18678	TGACAGAAGAGAGTGAGCAC	GCTCACTTCTCTCTCTGTCAGC	up	0	2

Secondary structure

CCGCGGCTGGCTGACAGAAGAGAGTGAGCACACAGCGGGCAGACTGCATCTGAATTACCTGTTGCGACGAAGAAGACGACGGACGCAGCTTGCCGTTGCGTGCTCACTTCTCTCTCTGTCAGCTCTCTCTC
----------CTGACAGAAGAGAGTGAGCAC 	15
-----------TGACAGAAGAGAGTGAGCACA 	39
-----------TGACAGAAGAGAGTGAGCAC 	2443
-----------TGACAGAAGAGAGTGAGCA 	33
------------GACAGAAGAGAGTGAGCACA 	23
------------GACAGAAGAGAGTGAGCAC 	11
-------------ACAGAAGAGAGTGAGCACA 	2
----------------GAAGAGAGTGAGCACACAGCG 	2
-----------------------------ACACAGCGGGCAGACTGCATC 	3
-----------------------------------------------------------------------------------------------------GCTCACTTCTCTCTCTGTCAGC 	33

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
98	Oryza sativa	GSM520639-18678	TTGACAGAAGAGAGTGAGCAC	GCTCGCTCCTCTTTCTGTCAGCA	up	1	2

Secondary structure

GTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTGAGCACACGGCGCGGCGGCTAGCCATCGGCGGGATGCCTGCCCCCGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCACTCCCTCCCGCATCCCCCGCCCCGATCTCGCGTCGATCTCTCATCTCC
-------------------------------------------------------AGATTGTTGACAGAAGAGAGTG 	4
----------------------------------------------------------TTGTTGACAGAAGAGAGTGAG 	2
-----------------------------------------------------------TGTTGACAGAAGAGAGTGAG 	1
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCACA 	1
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCA 	82
-------------------------------------------------------------TTGACAGAAGAGAGTGAGCAC 	6380
-------------------------------------------------------------TTGACAGAAGAGAGTGAGC 	38
--------------------------------------------------------------TGACAGAAGAGAGTGAGCACA 	39
--------------------------------------------------------------TGACAGAAGAGAGTGAGCAC 	2443
--------------------------------------------------------------TGACAGAAGAGAGTGAGCA 	33
---------------------------------------------------------------GACAGAAGAGAGTGAGCACA 	23
---------------------------------------------------------------GACAGAAGAGAGTGAGCAC 	11
----------------------------------------------------------------ACAGAAGAGAGTGAGCACA 	2
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAG 	23
-------------------------------------------------------------------------------------------------------------------------------TGCTCGCTCCTCTTTCTGTCAGC 	5
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGCA 	11
--------------------------------------------------------------------------------------------------------------------------------GCTCGCTCCTCTTTCTGTCAGC 	37
----------------------------------------------------------------------------------------------------------------------------------TCGCTCCTCTTTCTGTCAG 	3

Overlaps with: MNEST048813
Overlaps with miRBase pre-miRNAs: osa-MIR156j osa-MIR156h
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
99	Oryza sativa	GSM520639-18678	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTTTCTGTCATC	up	0	2

Secondary structure

GGGCGGGCCGGTGGCGCGAGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGTGACGGCACCGGCGGGCGTGCCGTCGCGGCCGCGTGCTCACTGCTCTTTCTGTCATCCGGTGCCGGCCGTTTTCT
--------------------GTGACAGAAGAGAGTGAGCAC 	2
---------------------TGACAGAAGAGAGTGAGCACA 	39
---------------------TGACAGAAGAGAGTGAGCAC 	2443
---------------------TGACAGAAGAGAGTGAGCA 	33
----------------------GACAGAAGAGAGTGAGCACA 	23
----------------------GACAGAAGAGAGTGAGCAC 	11
-----------------------ACAGAAGAGAGTGAGCACA 	2
------------------------------------------------------------------------------------CGTGCTCACTGCTCTTTCTGTC 	3
---------------------------------------------------------------------------------------GCTCACTGCTCTTTCTGTCATC 	3

Overlaps with: MNEST041908 MNEST048805
Overlaps with miRBase pre-miRNAs: osa-MIR156e
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
100	Oryza sativa	GSM520639-18678	TGACAGAAGAGAGTGAGCAC	GCTCACTGCTCTGTCTGTCATC	up	0	2

Secondary structure

GCCGGTGCGGGCGCTGGGCGGTGACAGAAGAGAGTGAGCACACGGCCGGGCGGAACGGCACCGGCGGATGTGCCGTCGCGGCCGCGTGCTCACTGCTCTGTCTGTCATCCACTCCTCTCCCACCCCC
-----------------GCGGTGACAGAAGAGAGTGAG 	1
--------------------GTGACAGAAGAGAGTGAGCAC 	2
---------------------TGACAGAAGAGAGTGAGCACA 	39
---------------------TGACAGAAGAGAGTGAGCAC 	2443
---------------------TGACAGAAGAGAGTGAGCA 	33
----------------------GACAGAAGAGAGTGAGCACA 	23
----------------------GACAGAAGAGAGTGAGCAC 	11
-----------------------ACAGAAGAGAGTGAGCACA 	2
--------------------------------------------------------------------------------------TGCTCACTGCTCTGTCTGTCATC 	3
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATC 	13
---------------------------------------------------------------------------------------GCTCACTGCTCTGTCTGTCATCC 	1
-----------------------------------------------------------------------------------------TCACTGCTCTGTCTGTCATC 	1

Overlaps with: MNEST041912 MNEST048809
Overlaps with miRBase pre-miRNAs: osa-MIR156i
HuntMi prediction: true miRNA