miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
61Arabidopsis thalianaAACGGCGTGAGTGCCGTAGAalignmentplotGSM278334-4059AT1G76080.1 cdna:known chromosome:TAIR10:1:28547786:28549419:-1 gene:AT1G76080 transcript:AT1G76080.129570.01333.5
5'     AACGGCGTGAGTGCCGTAGA         3'
       ||| || |||||o||| |||
3' GTGCTTG-CGGACTCATGGCTTCTTAGAGAGG 5'
245Arabidopsis thalianaAACGGCGTGAGTGCCGTAGAalignmentplotGSM278335-4060AT1G80950.1 cdna:known chromosome:TAIR10:1:30412544:30415113:-1 gene:AT1G80950 transcript:AT1G80950.114620664
5'     AACGGCGTGAGTGCCGTAGA         3'
       |||o||||o|o|o|| || |
3' TCTTTTGTCGCATTTATGGGATGTTTAGTTCA 5'
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