miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
77Arabidopsis thalianaAAGCTCAGGAGGGATAGCGCCalignmentplotGSM278334-4059AT5G57735.1 cdna:known chromosome:TAIR10:5:23394005:23394500:1 gene:AT5G57735 transcript:AT5G57735.104290333
5'     AAGCTCAGGAGGGATAGCGCC        3'
       ||||||||||||o|||| o |
3' GTATTTCGAGTCCTCCTTATCTTTGTTGTTTG 5'
260Arabidopsis thalianaAAGCTCAGGAGGGATAGCGCCalignmentplotGSM278335-4060AT5G57735.1 cdna:known chromosome:TAIR10:5:23394005:23394500:1 gene:AT5G57735 transcript:AT5G57735.11429020203
5'     AAGCTCAGGAGGGATAGCGCC        3'
       ||||||||||||o|||| o |
3' GTATTTCGAGTCCTCCTTATCTTTGTTGTTTG 5'
437Arabidopsis thalianaAAGCTCAGGAGGGATAGCGCCalignmentplotGSM278370-4061AT5G57735.1 cdna:known chromosome:TAIR10:5:23394005:23394500:1 gene:AT5G57735 transcript:AT5G57735.124290.01663
5'     AAGCTCAGGAGGGATAGCGCC        3'
       ||||||||||||o|||| o |
3' GTATTTCGAGTCCTCCTTATCTTTGTTGTTTG 5'
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