miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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6 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1668Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911923gi|241989722|gb|AK330263.1|AK330263 HTC Triticum aestivum cDNA, clone: SET4_A13, cultivar: Chinese Spring.233280.03333
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||||||| ||||
3' AATATAAAT-CCTTGCCTCCGTCATCTTTCGT 5'
1689Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911923gi|32128877|gb|BT009326.1|BT009326 PLN Triticum aestivum clone wlm24.pk0016.f9:fis, full insert mRNA sequence.218800.05313
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||||| ||||||
3' TTTATAAAT-CCTTGCCTACCTCATGATGTCT 5'
1747Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911923gi|241983524|gb|AK331464.1|AK331464 HTC Triticum aestivum cDNA, clone: WT007_J01, cultivar: Chinese Spring.210000.02993
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||| ||||||||
3' AATATAAAT-CCTTGCATCCCTCATAAAACGT 5'
1813Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911924gi|241989722|gb|AK330263.1|AK330263 HTC Triticum aestivum cDNA, clone: SET4_A13, cultivar: Chinese Spring.233280.0222223
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||||||| ||||
3' AATATAAAT-CCTTGCCTCCGTCATCTTTCGT 5'
1844Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911924gi|32128877|gb|BT009326.1|BT009326 PLN Triticum aestivum clone wlm24.pk0016.f9:fis, full insert mRNA sequence.218800.03103.666673
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||||| ||||||
3' TTTATAAAT-CCTTGCCTACCTCATGATGTCT 5'
1916Triticum aestivumAATTATGGAACGGAGGGAGTAalignmentplotGSM911924gi|241983524|gb|AK331464.1|AK331464 HTC Triticum aestivum cDNA, clone: WT007_J01, cultivar: Chinese Spring.210000.0317173
5'     AATTATGGAACGGAGGGAGTA        3'
       | ||| |||||| ||||||||
3' AATATAAAT-CCTTGCATCCCTCATAAAACGT 5'
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