miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
140Arabidopsis thalianaACTCGACCAGGGGGTCGAGTalignmentplotGSM278335-4060AT5G11040.1 cdna:known chromosome:TAIR10:5:3495287:3500922:1 gene:AT5G11040 transcript:AT5G11040.1213600.04334
5'     ACTCGACCAGGGGGTCGAGT         3'
       |||||| |||||o| |o| |
3' ACCCTGAGCTTGTCCCTCTGTT-ACCTTACTA 5'
346Arabidopsis thalianaACTCGACCAGGGGGTCGAGTalignmentplotGSM278370-4061AT5G13930.1 cdna:known chromosome:TAIR10:5:4488688:4490264:1 gene:AT5G13930 transcript:AT5G13930.127140.05774
5'     ACTCGACCAGGGGGTCGAGT         3'
       || |||| ||||o|||o||
3' GGACTG-GCTGCTCCCTCAGTTCCACCCACAG 5'
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