miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
295Arabidopsis thalianaAGAGAAACCCAACAGCATCATalignmentplotGSM278335-4060AT1G69160.1 cdna:known chromosome:TAIR10:1:26000214:26001588:1 gene:AT1G69160 transcript:AT1G69160.1011810.0412124
5'     AGAGAAACCCAACAGCATCAT        3'
        o|||||||||| |o||| ||
3' TTAGGTTCTTTGGGTTTTTGTA-TATTGAATA 5'
471Arabidopsis thalianaAGAGAAACCCAACAGCATCATalignmentplotGSM278370-4061AT1G69160.1 cdna:known chromosome:TAIR10:1:26000214:26001588:1 gene:AT1G69160 transcript:AT1G69160.1011810.0218184
5'     AGAGAAACCCAACAGCATCAT        3'
        o|||||||||| |o||| ||
3' TTAGGTTCTTTGGGTTTTTGTA-TATTGAATA 5'
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