miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1233Medicago truncatulaAGATTGAGACTTGTATGGCTTalignmentplotGSM643817_GDN-4gi|14881697|gb|BI272404.1|BI272404 NF024H12FL1F1103 Developing flower Medicago truncatula cDNA clone NF024H12FL 5', mRNA sequenc21320.0450.7142863
5'     AGATTGAGACTTGTATGGCTT        3'
       |||| || |||||||||| ||
3' CACCTCTACCTATGAACATACCAAAAAATCCA 5'
1338Medicago truncatulaAGATTGAGACTTGTATGGCTTalignmentplotGSM643817_GDN-4gi|13595643|gb|BG580579.1|BG580579 EST482306 GVN Medicago truncatula cDNA clone pGVN-57P18 5' end, mRNA sequence05220.02224
5'     AGATTGAGACTTGTATGGCTT        3'
       ||| ||| |||| ||| ||||
3' AAAGTCTTACT-TGAAAATAACGAAATTGTAA 5'
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