miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
977Hordeum vulgareAGGGTCATCTGTGACGGGCTCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_55673.10 cdna:known chromosome:030312v2:2:379955737:379958978:-1 gene:MLOC_55673 transcript:MLOC_55673.10213170.01165.333333
5'     AGGGTCATCTGTGACGGGCTC        3'
       |||o|||||||||||o|  ||
3' CAGGTCCTAGTAGACACTGTCGAAGAAGAGGT 5'
1142Hordeum vulgareAGGGTCATCTGTGACGGGCTCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_8224.2 cdna:novel chromosome:030312v2:7HL:13076770:13079417:1 gene:MLOC_8224 transcript:MLOC_8224.22753012122.5
5'     AGGGTCATCTGTGACGGGCTC        3'
       |||||||||| ||||| o|||
3' GAGGTCCCAGTAGAAACTGCGTGAGAGAGGTA 5'
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