miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
903Hordeum vulgareAGTACTTCCTCCGTCCCAAAAalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_54692.6 cdna:novel chromosome:030312v2:2:465643059:465648897:-1 gene:MLOC_54692 transcript:MLOC_54692.62118701223
5'     AGTACTTCCTCCGTCCCAAAA        3'
       |o||||o|||| ||| |||||
3' TACTTTATGAGGGAGACAGTGTTTTCTATTCA 5'
1031Hordeum vulgareAGTACTTCCTCCGTCCCAAAAalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_10600.5 cdna:novel chromosome:030312v2:6:354028574:354033288:-1 gene:MLOC_10600 transcript:MLOC_10600.5216130.011053
5'     AGTACTTCCTCCGTCCCAAAA        3'
       | ||||||||| || ||||||
3' TTAGT-ATGAAGGAGACATGGTTTTATTAACA 5'
1093Hordeum vulgareAGTACTTCCTCCGTCCCAAAAalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_61642.2 cdna:known chromosome:030312v2:7:555938286:555947384:1 gene:MLOC_61642 transcript:MLOC_61642.2214460991.5
5'     AGTACTTCCTCCGTCCCAAAA        3'
       | ||||o||||||||||||||
3' ACAAT-ATGAGGGAGGCAGGGTTTTATTCACA 5'
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