miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures

Degradomes

2 records found

#	species	miRNA	short reads alignment	plot	library	transcript	category	cleavage position	P-value	fragment abundance	weighted fragment abundance	alignment score	miRNA-target alignment
1222	Medicago truncatula	AGTTTTCCTCGGTAGTTAACT	alignment	plot	GSM643817_GDN-4	gi\|6605651\|gb\|AW257394.1\|AW257394 EST305531 KV2 Medicago truncatula cDNA clone KV2-9H1, mRNA sequence	0	476	0.03	5	1.25	3.5	5' AGTTTTCCTCGGTAGTTAACT 3' \|\|o\|o\| \|\|\|o\|o\|\|o\|\|\|\|\| 3' TAACTCGAGA-GAGTCGTCGATTGAACAGAAG 5'
1269	Medicago truncatula	AGTTTTCCTCGGTAGTTAACT	alignment	plot	GSM643817_GDN-4	gi\|11930806\|gb\|BE320886.2\|BE320886 NF028A05RT1F1033 Developing root Medicago truncatula cDNA clone NF028A05RT 5', mRNA sequence	0	127	0	5	1.25	3.5	5' AGTTTTCCTCGGTAGTTAACT 3' \|\|o\|o\| \|\|\|o\|o\|\|o\|\|\|\|\| 3' TAACTCGAGA-GAGTCGTCGATTGAACAGAAG 5'