miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1744Triticum aestivumATAGCATCATCCATCCTACCAalignmentplotGSM911923gi|241989083|gb|AK336062.1|AK336062 HTC Triticum aestivum cDNA, clone: SET3_C06, cultivar: Chinese Spring.06190.0181814
5'     ATAGCATCATCCATC-CTACCA       3'
       || |||||||||||| | |||
3' TTTGTAACGTAGTAGGTAGTGTTGGAGGTTTG 5'
1751Triticum aestivumATAGCATCATCCATCCTACCAalignmentplotGSM911923gi|241987514|gb|AK334771.1|AK334771 HTC Triticum aestivum cDNA, clone: WT011_A02, cultivar: Chinese Spring.0156107137134
5'     ATAGCATCATCCATCCTACCA        3'
       |||||||||||||| |  ||
3' CCTGTATCGTAGTAGGTAAGCCGGGTACGACG 5'
1826Triticum aestivumATAGCATCATCCATCCTACCAalignmentplotGSM911924gi|241983466|gb|AK331406.1|AK331406 HTC Triticum aestivum cDNA, clone: WT007_G17, cultivar: Chinese Spring.08580553
5'     ATAGCATCATCCATCCTACCA        3'
        |||||||||||| ||||||
3' CCGGGATCGTAGTAGGTCGGATGGGTTCGAGC 5'
1915Triticum aestivumATAGCATCATCCATCCTACCAalignmentplotGSM911924gi|241989083|gb|AK336062.1|AK336062 HTC Triticum aestivum cDNA, clone: SET3_C06, cultivar: Chinese Spring.0619032324
5'     ATAGCATCATCCATC-CTACCA       3'
       || |||||||||||| | |||
3' TTTGTAACGTAGTAGGTAGTGTTGGAGGTTTG 5'
1924Triticum aestivumATAGCATCATCCATCCTACCAalignmentplotGSM911924gi|241987514|gb|AK334771.1|AK334771 HTC Triticum aestivum cDNA, clone: WT011_A02, cultivar: Chinese Spring.0156109699694
5'     ATAGCATCATCCATCCTACCA        3'
       |||||||||||||| |  ||
3' CCTGTATCGTAGTAGGTAAGCCGGGTACGACG 5'
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