miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
652Glycine maxATATAGCATCGTGAGCAATCAalignmentplotGSM848964_SC25_unique_seq_countGLYMA03G38100.1 cdna:known chromosome:V1.0:Gm03:44505410:44509305:-1 gene:GLYMA03G38100 transcript:GLYMA03G38100.127880.0420203
5'     ATATAGCATCGTGA-GCAATCA       3'
       |||o||||||||o| ||| |||
3' TTCGTATGTCGTAGCATTACGTAAGTTATAAG 5'
791Glycine maxATATAGCATCGTGAGCAATCAalignmentplotGSM848964_SC25_unique_seq_countGLYMA13G23520.3 cdna:novel chromosome:V1.0:Gm13:26916462:26919844:-1 gene:GLYMA13G23520 transcript:GLYMA13G23520.312980.01206.666674
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o||||||  o|o|||o||
3' AAAGTATGTCGTAGGTTTTGTTGGTGGGTATG 5'
860Glycine maxATATAGCATCGTGAGCAATCAalignmentplotGSM848965_Cot100_unique_seq_countGLYMA13G23520.1 cdna:known chromosome:V1.0:Gm13:26916462:26919844:-1 gene:GLYMA13G23520 transcript:GLYMA13G23520.112980165.333334
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o||||||  o|o|||o||
3' AAAGTATGTCGTAGGTTTTGTTGGTGGGTATG 5'
883Glycine maxATATAGCATCGTGAGCAATCAalignmentplotGSM848965_Cot100_unique_seq_countGLYMA13G23520.2 cdna:known chromosome:V1.0:Gm13:26916462:26919844:-1 gene:GLYMA13G23520 transcript:GLYMA13G23520.213030.01165.333334
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o||||||  o|o|||o||
3' AAAGTATGTCGTAGGTTTTGTTGGTGACAAGG 5'
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