miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
591Glycine maxCAGAGAGCAGAAACAGAACTGalignmentplotGSM848963_Cot25_unique_seq_countGLYMA01G35410.1 cdna:novel chromosome:V1.0:Gm01:47910024:47911708:-1 gene:GLYMA01G35410 transcript:GLYMA01G35410.107050.0530304
5'     CAGAGAGCAGAAACAGAACTG        3'
       |||| |o|||||| ||| |o|
3' CTTCGTCT-TTGTCTTTCTCTGGGCAGAAATC 5'
618Glycine maxCAGAGAGCAGAAACAGAACTGalignmentplotGSM848963_Cot25_unique_seq_countGLYMA18G39771.2 cdna:novel chromosome:V1.0:Gm18:47890776:47893894:-1 gene:GLYMA18G39771 transcript:GLYMA18G39771.2077704723.53
5'     CAGAGAGCAGAAACAGAACTG        3'
       ||| | ||||||| |||||||
3' CGTAGTCGCACGTCTTT-TCTTGACAATCTTC 5'
622Glycine maxCAGAGAGCAGAAACAGAACTGalignmentplotGSM848963_Cot25_unique_seq_countGLYMA08G15090.1 cdna:known chromosome:V1.0:Gm08:10946832:10949797:1 gene:GLYMA08G15090 transcript:GLYMA08G15090.116600.0430304
5'     CAGAGAGCAGAAACAGAACTG        3'
        |||o|| ||||||| ||||o
3' AACGATCTTTCATCTTTGT-TTGATAACAGAT 5'
867Glycine maxCAGAGAGCAGAAACAGAACTGalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G15090.1 cdna:known chromosome:V1.0:Gm08:10946832:10949797:1 gene:GLYMA08G15090 transcript:GLYMA08G15090.106600.0255554
5'     CAGAGAGCAGAAACAGAACTG        3'
        |||o|| ||||||| ||||o
3' AACGATCTTTCATCTTTGT-TTGATAACAGAT 5'
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