miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


6 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment

1189Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|157979521|gb|EX527793.1|EX527793 MTGland_A033_2007-06-18/MTGlandA033_C04_014_1 Medicago truncatula A17 glandular trichome Med16380.05630.3477133
5'     CGTCTTCATCATCATCA-CATT       3'
|o|| |||||||||||| |||o
3' AGTAGTAGTAGTAGTAGTAGTAGTAGTAATAA 5'
1231Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|157982941|gb|EX531213.1|EX531213 MTGland_B020_2007-05-15/MTGlandB020__G12_042_1 Medicago truncatula A17 glandular trichome Me1520.02222.5
5'     CGTCTTCATCATCATCACATT        3'
|| ||||||||||o||||||
3' GTCGCCA-AAGTAGTAGTGGTGTAAGCGATAA 5'
1251Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|14879629|gb|BI271284.1|BI271284 NF014D03FL1F1029 Developing flower Medicago truncatula cDNA clone NF014D03FL 5', mRNA sequenc1560.05630.3477133
5'     CGTCTTCATCATCATCA-CATT       3'
|o|| |||||||||||| |||o
3' AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG 5'
1252Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|14879629|gb|BI271284.1|BI271284 NF014D03FL1F1029 Developing flower Medicago truncatula cDNA clone NF014D03FL 5', mRNA sequenc1590.05630.3477133
5'     CGTCTTCATCATCATCA-CATT       3'
|o|| |||||||||||| |||o
3' AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG 5'
1283Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|13368671|gb|BG449889.1|BG449889 NF071H03IN1F1031 Insect herbivory Medicago truncatula cDNA clone NF071H03IN 5', mRNA sequence05330.02333
5'     CGTCTTCATCATCATCA-CATT       3'
| ||o|||||||||||| |||o
3' AGAAGGAGGAGTAGTAGTAGTCGTAGCAGAAG 5'
1314Medicago truncatulaCGTCTTCATCATCATCACATTalignmentplotGSM643817_GDN-4gi|20284133|gb|BQ147074.1|BQ147074 NF032B03FL1F1029 Developing flower Medicago truncatula cDNA clone NF032B03FL 5', mRNA sequenc03090.03110.7162163
5'     CGTCTTCATCATCATCA-CATT       3'
|o|| |||||||||||| |||o
3' AGAAGTAGTAGTAGTAGTAGTAGTAGTAGTAG 5'
Entries Per Page
Displaying Page of