miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1361Physcomitrella patensCGTCTTCCTCTTCCTCTTCCTalignmentplotGSM410805-5251PP1S44_263V6.3 cdna:known scaffold:ASM242v1:DS544933.1:1674521:1678736:-1 gene:PP1S44_263V6 transcript:PP1S44_263V6.31320.05224
5'     CGTCTTCCTCTTCCTCTTCCT        3'
       |||| |||||o|| | o||||
3' GGTAGCAGTAGGAGGAGCACGAGGAGGAGGAG 5'
1371Physcomitrella patensCGTCTTCCTCTTCCTCTTCCTalignmentplotGSM410805-5251PP1S163_90V6.1 cdna:known scaffold:ASM242v1:DS545052.1:680865:682493:1 gene:PP1S163_90V6 transcript:PP1S163_90V6.11400.0216162.5
5'     CGTCTTCCTCTTCCTCTTCCT        3'
       ||o|o|||||o|||||o|||o
3' CGCGGCGGGAGGAGGAGGAGGAGGGGAGGGGA 5'
Entries Per Page
Displaying Page of