miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1520Solanum lycopersicumCTAGATTCACGCACAAGCTCGalignmentplotGSM553688-9229Solyc02g069260.2.1 cdna:novel chromosome:SL2.40:2:33782147:33788905:1 gene:Solyc02g069260.2 transcript:Solyc02g069260.2.10326003683682.5
5'     CTAGATTCACGCACAAGCTCG        3'
        |||||||||||||||o|||
3' GGGTAATCTAAGTGCGTGTTTGAGGAAACGTT 5'
1573Solanum lycopersicumCTAGATTCACGCACAAGCTCGalignmentplotGSM553689-9230Solyc02g069260.2.1 cdna:novel chromosome:SL2.40:2:33782147:33788905:1 gene:Solyc02g069260.2 transcript:Solyc02g069260.2.10326001261262.5
5'     CTAGATTCACGCACAAGCTCG        3'
        |||||||||||||||o|||
3' GGGTAATCTAAGTGCGTGTTTGAGGAAACGTT 5'
1625Solanum lycopersicumCTAGATTCACGCACAAGCTCGalignmentplotGSM553690-9231Solyc02g069260.2.1 cdna:novel chromosome:SL2.40:2:33782147:33788905:1 gene:Solyc02g069260.2 transcript:Solyc02g069260.2.10326004254252.5
5'     CTAGATTCACGCACAAGCTCG        3'
        |||||||||||||||o|||
3' GGGTAATCTAAGTGCGTGTTTGAGGAAACGTT 5'
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