miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


8 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1645Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911923gi|241985236|gb|AK332496.1|AK332496 HTC Triticum aestivum cDNA, clone: WT004_B23, cultivar: Chinese Spring.227530552.5
5'     CTCCGTCCCAAAATATAAGAA        3'
       |||||o|||| |||||||||
3' GAGAGAGGCGGGGTATTATATTCTCGTAAAAA 5'
1655Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911923gi|241986094|gb|AK333355.1|AK333355 HTC Triticum aestivum cDNA, clone: WT006_E09, cultivar: Chinese Spring.28250.0311113
5'     CTCCGTCCCAAAATATAAGAA        3'
       ||| |||||| |||||||||
3' GAGAGAGACAGGGTATTATATTCTCGTAAAAA 5'
1715Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911923gi|241986608|gb|AK333869.1|AK333869 HTC Triticum aestivum cDNA, clone: SET2_C23, cultivar: Chinese Spring.215060331
5'     CTCCGTCCCAAAATATAAGAA        3'
       |||||||||| ||||||||||
3' GAGGGAGGCAGGGTATTATATTCTTGCAAAAA 5'
1732Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911923gi|241990551|gb|AK330708.1|AK330708 HTC Triticum aestivum cDNA, clone: SET5_B19, cultivar: Chinese Spring.232770221
5'     CTCCGTCCCAAAATATAAGAA        3'
       |||||||||| ||||||||||
3' GAGGGAGGCAGGGTATTATATTCTTGCAAAAA 5'
1788Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911924gi|241985236|gb|AK332496.1|AK332496 HTC Triticum aestivum cDNA, clone: WT004_B23, cultivar: Chinese Spring.227530.0318182.5
5'     CTCCGTCCCAAAATATAAGAA        3'
       |||||o|||| |||||||||
3' GAGAGAGGCGGGGTATTATATTCTCGTAAAAA 5'
1801Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911924gi|241986094|gb|AK333355.1|AK333355 HTC Triticum aestivum cDNA, clone: WT006_E09, cultivar: Chinese Spring.28250.02223
5'     CTCCGTCCCAAAATATAAGAA        3'
       ||| |||||| |||||||||
3' GAGAGAGACAGGGTATTATATTCTCGTAAAAA 5'
1850Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911924gi|241989169|gb|AK336148.1|AK336148 HTC Triticum aestivum cDNA, clone: SET3_F15, cultivar: Chinese Spring.212060220.5
5'     CTCCGTCCCAAAATATAAGAA        3'
       ||||o||||||||||||||||
3' GAGGGAGGTAGGGTTTTATATTCTTACAAAAA 5'
1880Triticum aestivumCTCCGTCCCAAAATATAAGAAalignmentplotGSM911924gi|241986608|gb|AK333869.1|AK333869 HTC Triticum aestivum cDNA, clone: SET2_C23, cultivar: Chinese Spring.215060441
5'     CTCCGTCCCAAAATATAAGAA        3'
       |||||||||| ||||||||||
3' GAGGGAGGCAGGGTATTATATTCTTGCAAAAA 5'
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