miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1948Vitis viniferaGGAATCTTGATGATGCTGCAGalignmentplotGSM458931-2730VIT_19s0014g04430.t01 cdna:novel chromosome:IGGP_12x:19:4714589:4721730:-1 gene:VIT_19s0014g04430 transcript:VIT_19s0014g04430.t23360.0320.43.5
5'     GGAATCTTGATGATGCTGCAG        3'
       ||||||||||||| | |o ||
3' CAGACCTTAGAACTACTTCTATTTCTTCCGGA 5'
1980Vitis viniferaGGAATCTTGATGATGCTGCAGalignmentplotGSM458931-2730VIT_19s0014g04590.t01 cdna:novel chromosome:IGGP_12x:19:4900009:4902808:-1 gene:VIT_19s0014g04590 transcript:VIT_19s0014g04590.t24650.0120.43.5
5'     GGAATCTTGATGATGCTGCAG        3'
       ||||||||||||| | |o ||
3' CAGACCTTAGAACTACTTCTATTTCTTCCGGA 5'
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