miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1049Hordeum vulgareGTATTCCCTCCGTCCCAAATAalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_58351.3 cdna:novel chromosome:030312v2:5:550929856:550930292:1 gene:MLOC_58351 transcript:MLOC_58351.322400.0152.53
5'     GTATTCCCTCCGTCCCAAATA        3'
        ||o|||||||o||||||| |
3' GGTTGATGAGGGAGGTAGGGTTT-TATATTCT 5'
1133Hordeum vulgareGTATTCCCTCCGTCCCAAATAalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_7480.1 cdna:novel chromosome:030312v2:1H:5846411:5849197:1 gene:MLOC_7480 transcript:MLOC_7480.1224100842
5'     GTATTCCCTCCGTCCCAAATA        3'
       o|||||||||||o|||||| |
3' TATGTATAAGGGAGGCGGGGTTT-TATTCAAT 5'
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