miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1212Medicago truncatulaTAATCTGCATCCTGAGGTTTAalignmentplotGSM643817_GDN-4gi|161108073|gb|EY476819.1|EY476819 METAV56TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence02670147492
5'     TAATCTGCATCCTGAGGTTTA        3'
       ||||||||||||||||||  |
3' TAATATTAGACGTAGGACTCCATTTCCAAGAA 5'
1266Medicago truncatulaTAATCTGCATCCTGAGGTTTAalignmentplotGSM643817_GDN-4gi|209566404|gb|GE348194.1|GE348194 MEUBF76TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence04470147492
5'     TAATCTGCATCCTGAGGTTTA        3'
       ||||||||||||||||||  |
3' TAATATTAGACGTAGGACTCCATTTCCAAGAA 5'
1335Medicago truncatulaTAATCTGCATCCTGAGGTTTAalignmentplotGSM643817_GDN-4gi|13779607|gb|BG644495.1|BG644495 EST506114 KV3 Medicago truncatula cDNA clone pKV3-37O12 5' end, mRNA sequence0502010102.5
5'     TAATCTGCATCCTGAGGTTTA        3'
       |||||||||||||| ||||o
3' TTGTATTAGACGTAGGACGCCAAGAACTGGAC 5'
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