miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
2008Vitis viniferaTAGCGAAGGATGACTTGCCTAalignmentplotGSM458931-2730VIT_11s0016g01480.t01 cdna:novel chromosome:IGGP_12x:11:1176254:1181820:1 gene:VIT_11s0016g01480 transcript:VIT_11s0016g01480.t0112500.03223.5
5'     TAGCGAAGGATGACTTGCCTA        3'
        ||| |||||||| |||||o|
3' TTGTTTCGGTTCCTACTTAACGGGTCTGGTCA 5'
2032Vitis viniferaTAGCGAAGGATGACTTGCCTAalignmentplotGSM458931-2730VIT_09s0002g01590.t01 cdna:novel chromosome:IGGP_12x:9:1383432:1390944:1 gene:VIT_09s0002g01590 transcript:VIT_09s0002g01590.t01113270.02223.5
5'     TAGCGAAGGATGACTTGCCTA        3'
       o||| ||||||||||| || |
3' TTGTGTCGGTTCCTACTGAAAGGTTCCCTGTG 5'
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