miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1015Hordeum vulgareTATACTCCCTCCGTCCGAAATalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_67470.1 cdna:known chromosome:030312v2:2:576417261:576422103:-1 gene:MLOC_67470 transcript:MLOC_67470.1219860.0118183
5'    TA-TACTCCCTCCGTCCGAAAT        3'
      || |||||||||||||| |||
3' AAGATGATGAGGGAGGCAGGATTTTATTCNNN 5'
1020Hordeum vulgareTATACTCCCTCCGTCCGAAATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6212140.01131.857143
5'     TATACTCCCTCCGTCCGAAAT        3'
       o||||||||| |o|||| |||
3' TGATGTATGAGGGAAGTAGGCCTTAATGAACA 5'
1159Hordeum vulgareTATACTCCCTCCGTCCGAAATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_63462.1 cdna:novel chromosome:030312v2:2:53816820:53821954:1 gene:MLOC_63462 transcript:MLOC_63462.1217960.031053.5
5'     TATACTCCCTCCGTCCGAAAT        3'
       | ||||||||||o||| |||
3' TAATAGATGAGGGAGGTAGGGTTTTATTCACA 5'
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