miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
957Hordeum vulgareTATAGTACTCCCTCCGTCCCGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_9522.1 cdna:novel chromosome:030312v2:1:124351345:124353037:1 gene:MLOC_9522 transcript:MLOC_9522.127140.0113132.5
5'     TATAGTACTCCCTCCGTCCCG        3'
        ||| |||||||||||||||o
3' TCATCTATGATGAGGGAGGCAGGGTATTTTCA 5'
982Hordeum vulgareTATAGTACTCCCTCCGTCCCGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_59190.1 cdna:novel chromosome:030312v2:4:491510721:491518872:-1 gene:MLOC_59190 transcript:MLOC_59190.1229340.0294.53.5
5'    TATA-GTACTCCCTCCGTCCCG        3'
      |||| ||||||||||||  ||o
3' TATATATCCATGAGGGAGGCTAGGTATAATTT 5'
992Hordeum vulgareTATAGTACTCCCTCCGTCCCGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_6070.4 cdna:known chromosome:030312v2:6HS:2185538:2188313:1 gene:MLOC_6070 transcript:MLOC_6070.4216810.01333.5
5'     TATAGTACTCCCTCCGTCCCG        3'
        ||| |||||||||||| ||o
3' CGTTTTATGATGAGGGAGGCAAGGTTTTNNNN 5'
1156Hordeum vulgareTATAGTACTCCCTCCGTCCCGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_62271.1 cdna:novel chromosome:030312v2:1H:33825497:33826822:-1 gene:MLOC_62271 transcript:MLOC_62271.127520.02157.53.5
5'     TATAGTACTCCCTCCGTCCCG        3'
       | |||| |||||||||||| o
3' TATTAGATCAAGAGGGAGGCAGGTTACATGAG 5'
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